Edinburgh-Genome-Foundry / tatapovLinks
DNA overhang misannealing data for Python
β13Updated 8 months ago
Alternatives and similar repositories for tatapov
Users that are interested in tatapov are comparing it to the libraries listed below
Sorting:
- Simple cloning simulator (Golden Gate etc.) for single and combinatorial assembliesβ64Updated 8 months ago
- π€ Python biolab automation library: parsers, report generators, picklist simulators, and moreβ46Updated 7 months ago
- Codon usage tables in code-friendly format + Python bindingsβ42Updated 8 months ago
- Enzyme-constrained genome-scale models in pythonβ30Updated 2 years ago
- An amino acid sequence annotatorβ17Updated 8 months ago
- General low-level APIβ50Updated 3 years ago
- Nanopore Plasmid Sequencingβ34Updated 2 years ago
- π¨ Python library to plot multi-part genetic constructsβ25Updated 9 months ago
- Python library to visualize circular plasmid mapsβ28Updated 4 years ago
- Webserver and command line tool for annotating engineered plasmidsβ136Updated 6 months ago
- β24Updated last year
- A Python project to read and write Snapgene *.dna into dict, json, and biopython object.β45Updated 5 years ago
- sensitive and precise assembly of short sequencing readsβ163Updated last year
- A PCR primer tool for DNA assembly flowsβ33Updated last year
- A pure Python implementation of the SBOL standard.β22Updated 11 months ago
- A route planner for DNA assemblyβ36Updated 8 months ago
- StrainDesign is a python package for the computational design of metabolic networks and based on COBRApyβ47Updated last month
- Predict oxygen, temperature, salinity, and pH preferences of bacteria and archaea from a genomeβ66Updated 9 months ago
- Find common blocks and differences between DNA sequencesβ42Updated 2 months ago
- A COBRApy extension for genome-scale models of metabolism and expression (ME-models)β35Updated 7 years ago
- ReFramed: metabolic modeling packageβ62Updated 4 months ago
- Analysis of ensembles of metabolic network reconstructionsβ21Updated last week
- The Ribosome Binding Site (RBS) Calculator can predict the translation initiation rate of a protein coding sequence in bacteria and desigβ¦β60Updated 10 years ago
- Software for predicting translation initiation rates in bacteriaβ30Updated 5 months ago
- Visualise RNA secondary structure in consistent, reproducible and recognisable layoutsβ77Updated last month
- scripts for predicting natural product activity from biosynthetic gene cluster sequencesβ24Updated 4 months ago
- β133Updated last year
- RNA secondary structure/sequence profiles for homology search and alignmentβ121Updated last month
- Read DNA sequences from colourful Microsoft Word documentsβ34Updated 8 months ago
- iCodon customizes gene expression based on the codon compositionβ15Updated 2 years ago