A Python library for interacting with ENA's API
☆25Aug 10, 2021Updated 4 years ago
Alternatives and similar repositories for enasearch
Users that are interested in enasearch are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Homebrew formulae for bioinformatics software only available for Linux☆27Aug 23, 2019Updated 6 years ago
- Inferring global and local strict molecular clocks using root-to-tip regression☆20Apr 24, 2026Updated last month
- Phylogenetics between and within hosts at once, all along the genome.☆51Oct 2, 2024Updated last year
- Flexible linear mixed model framework for Genome Wide Association Studies☆18Nov 6, 2025Updated 7 months ago
- Pipeline to generate NGS reads from a phylogeny☆39Sep 13, 2022Updated 3 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Precursor to SnakeChunks, see https://github.com/SnakeChunks/SnakeChunks. This project has moved and will no longer be edited here.☆11Sep 20, 2017Updated 8 years ago
- kaamer - protein identification based on amino acid kmers☆11Mar 7, 2023Updated 3 years ago
- Extract lineage CSVs from NCBI for use with sourmash lca.☆29Oct 4, 2023Updated 2 years ago
- ☆13Jun 4, 2026Updated last week
- ☆14Apr 30, 2020Updated 6 years ago
- Indels are not ideal - quick test for interrupted ORFs in bacterial/microbial genomes☆15Jun 26, 2018Updated 7 years ago
- Public Health England SNP calling pipeline.☆37Sep 4, 2018Updated 7 years ago
- Exposing public genomics data via computable and searchable metadata☆13Jul 9, 2024Updated last year
- NCBI Pathogen Detection Portal toolkit☆11Sep 6, 2023Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆38Jan 12, 2026Updated 4 months ago
- tools for assessing the accuracy of genome assemblies☆35Apr 16, 2024Updated 2 years ago
- MGnify documentation and Jupyter Lab notebooks to support downstream analysis of MGnify data (EMBL-EBI's metagenomics platform)☆15Jun 2, 2026Updated last week
- VESPA: Very large-scale Evolutionary and Selective Pressure Analyses☆15Mar 18, 2022Updated 4 years ago
- Bioinformatics course (WSBIM1322)☆16Mar 31, 2026Updated 2 months ago
- Report salient qPCR primer/probe or immune epitope mismatches info against a set of pathogen isolate genomes☆16Mar 11, 2025Updated last year
- highthroughput rRNA sequence classification and OTU mapping for metagenomic samples☆28Nov 3, 2023Updated 2 years ago
- (Obsolete) NCBI Prokaryotic Genome Annotation Pipeline. New site:☆16Sep 7, 2018Updated 7 years ago
- A Python phyloinformatic toolkit, and an implementation of tree-heterogeneous models of evolution☆30Mar 11, 2026Updated 3 months ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Nextflow workshop 2018 -- Training pages -> https://nextflow-io.github.io/nf-hack18/☆19Mar 24, 2019Updated 7 years ago
- (a) (p)erfect (c)ircle? ... tests DNA sequences for overlapping ends, then trims and rejoins, and aligns reads to test the join☆10Apr 29, 2021Updated 5 years ago
- A generalised, dynamic DNA reference library for metabarcoding of fishes☆19May 6, 2026Updated last month
- a collection of scripts for organising bacterial genomes by species☆80Mar 18, 2022Updated 4 years ago
- Code to reproduce analyses from the sleuth paper☆16Nov 20, 2018Updated 7 years ago
- Python bindings to minimap2☆16Sep 18, 2017Updated 8 years ago
- The repository keeps the files for an IPython notebook on about how to make a simple genome assembler using python☆30May 10, 2018Updated 8 years ago
- A pipeline for bioinformatics analysis of bacterial genomes☆34Apr 26, 2026Updated last month
- libstrbuf: A powerful string library for C☆17Oct 15, 2016Updated 9 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Simple tool to verticalize text delimited files.☆37May 6, 2024Updated 2 years ago
- UZH BIO392: Bioinformatics of Sequence Variation Course Repository☆14May 29, 2026Updated last week
- Main development repository for SpreadGL☆22Sep 30, 2024Updated last year
- Converts Prokka GFF3 files to EMBL files for uploading annotated assemblies to EBI☆29Dec 4, 2018Updated 7 years ago
- A list of weak Bacterial assemblies in GenBank☆18Aug 3, 2017Updated 8 years ago
- Automated pipeline for amplicon sequence analysis☆11Nov 25, 2025Updated 6 months ago
- Bioinformatics lecture slides 2014☆11Jun 26, 2016Updated 9 years ago