bebatut / enasearchLinks
A Python library for interacting with ENA's API
☆23Updated 4 years ago
Alternatives and similar repositories for enasearch
Users that are interested in enasearch are comparing it to the libraries listed below
Sorting:
- Malleable All-seeing Journal Of Research Artifacts☆35Updated 2 years ago
- ☆18Updated 8 years ago
- Making Snakemake workflows into full-fledged command line tools since 1999.☆51Updated 7 years ago
- http://www.combio.pl/alfree☆23Updated 3 years ago
- Snakemake skeleton - Build workflows with Snakemake☆19Updated last year
- CAMITAX: Taxon labels for microbial genomes☆30Updated last year
- Utility program for extracting sequences from a fasta/fastq file☆35Updated 9 months ago
- VIRULIGN: fast codon-correct alignment and annotation of viral genomes☆35Updated 4 years ago
- Metagenomic profiling and phylogenetic distances via common kmers☆42Updated 4 years ago
- Python bindings for Bifrost's compacted colored de Bruijn Graph with a NetworkX-compatible API☆27Updated 2 years ago
- Bioinformatics pipeline for nanopore sequencing data☆11Updated 6 years ago
- ⛰ covtobed | Convert the coverage track from a BAM file into a BED file☆44Updated 4 months ago
- blast, shmlast☆21Updated 5 years ago
- Converts Prokka GFF3 files to EMBL files for uploading annotated assemblies to EBI☆29Updated 6 years ago
- Fast, scalable, accurate and accessible Bayesian phylogenetics☆40Updated last week
- Implementation of Krona to QIIME2☆16Updated last year
- Bam Read Index - Extract alignments from a bam file by readname☆28Updated last year
- ☆23Updated 6 years ago
- Main development repository for SpreadGL☆19Updated last year
- A pipeline for preprocessing NGS data from Illumina, Nanopore and PacBio technologies☆36Updated last year
- Confirming specific taxonomic groups within your samples.☆19Updated 4 years ago
- simple bioinformatics command-line (t)ools (i) (w)ished (i) (h)ad.☆44Updated 2 years ago
- map Illumina metagenomes to genomes!☆38Updated last month
- FAST: Fast Analysis of Sequences Toolbox☆31Updated 6 years ago
- Biological Graphic tool in Python☆34Updated 5 years ago
- A Nextflow pipeline to identify quality control issues with new sequencing data.☆28Updated 2 years ago
- Visualization tool for (meta)genome assembly graphs☆23Updated last year
- BACTpipe: An assembly and annotation pipeline for bacterial genomics☆20Updated 10 months ago
- reference free variant assembly☆34Updated 2 years ago
- Visualization of the pan-genome output by panX☆64Updated 4 months ago