Alternatives and similar repositories for QUEEN:

Users that are interested in QUEEN are comparing it to the libraries listed below

• ponnhide / plasmidviewer
  Python library to visualize circular plasmid maps
  ☆24Updated 3 years ago
• Edinburgh-Genome-Foundry / codon-usage-tables
  Codon usage tables in code-friendly format + Python bindings
  ☆36Updated last week
• Lattice-Automation / primers
  A PCR primer tool for DNA assembly flows
  ☆31Updated 11 months ago
• r2dt-bio / R2DT
  Visualise RNA secondary structure in consistent, reproducible and recognisable layouts
  ☆72Updated 3 weeks ago
• IsaacLuo / SnapGeneFileReader
  A Python project to read and write Snapgene *.dna into dict, json, and biopython object.
  ☆39Updated 4 years ago
• Edinburgh-Genome-Foundry / DnaCauldron
  Simple cloning simulator (Golden Gate etc.) for single and combinatorial assemblies
  ☆57Updated last week
• fteufel / signalp-6.0
  Multi-class signal peptide prediction and structure decoding model.
  ☆84Updated 2 months ago
• mmcguffi / pLannotate
  Webserver and command line tool for annotating engineered plasmids
  ☆117Updated last month
• ponnhide / sangerseq_viewer
  sangerseq_viewer is a python package to automatically visualize Sanger sequencing results and the corresponding annotated sequence map.
  ☆34Updated 10 months ago
• nf-core / proteinfold
  Protein 3D structure prediction pipeline
  ☆79Updated this week
• dincarnato / RNAFramework
  RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis
  ☆38Updated last week
• Arcadia-Science / ProteinCartography
  a pipeline to build similarity maps of protein space
  ☆33Updated 4 months ago
• mckennalab / Circuitseq
  Nanopore Plasmid Sequencing
  ☆32Updated last year
• TeselaGen / tg-oss
  Teselagen Open Source modules
  ☆56Updated this week
• moshi4 / pyMSAviz
  MSA(Multiple Sequence Alignment) visualization python package for sequence analysis
  ☆124Updated 4 months ago
• Lattice-Automation / seqfold
  nucleic acid folding
  ☆91Updated 8 months ago
• Global-Biofoundries-Alliance / SynBioPython
  General low-level API
  ☆50Updated 2 years ago
• jordisr / cellscape
  Vector graphics cartoons from protein structure
  ☆42Updated 2 years ago
• hiyama341 / teemi
  teemi: A Python package for reproducible and FAIR microbial strain construction. Simulate the entire dbtl-cycle, generate genetic parts, …
  ☆41Updated last month
• Edinburgh-Genome-Foundry / Plateo
  🤖 Python biolab automation library: parsers, report generators, picklist simulators, and more
  ☆43Updated last week
• hsalis / SalisLabCode
  Models, design algorithms, and other software related to Salis lab publications
  ☆30Updated 5 months ago
• manulera / OpenCloning
  An Open-Source web application to plan and document cloning and genome engineering
  ☆23Updated 2 weeks ago
• Edinburgh-Genome-Foundry / DnaWeaver
  A route planner for DNA assembly
  ☆32Updated 2 weeks ago
• Edinburgh-Genome-Foundry / Geneblocks
  Find common blocks and differences between DNA sequences
  ☆41Updated last week
• DessimozLab / fold_tree
  snakemake pipeline for creating trees from sequence sets
  ☆76Updated last month
• cusbg / traveler
  Template-based RNA secondary structure visualization
  ☆26Updated 4 months ago
• JamieHeather / TubeStorageTemplates
  Spreadsheet template files for 9x9 and 10x10 tube storage boxes for freezing biological samples
  ☆12Updated 8 years ago
• OrensteinLab / DeCoDe
  Degenerate Codon Design
  ☆13Updated 5 years ago
• ViennaRNA / forgi
  An RNA manipulation library.
  ☆54Updated last year
• FowlerLab / Enrich2
  Tool for deep mutational scanning experiments.
  ☆49Updated last month