QUEEN: a framework to generate quinable and efficiently editable nucleotide sequence resources
☆46Feb 1, 2026Updated last month
Alternatives and similar repositories for QUEEN
Users that are interested in QUEEN are comparing it to the libraries listed below
Sorting:
- sangerseq_viewer is a python package to automatically visualize Sanger sequencing results and the corresponding annotated sequence map.☆40May 27, 2024Updated last year
- An Open-Source web application to plan and document cloning and genome engineering☆45Updated this week
- Batch domestication of genetic parts with Python☆16May 12, 2025Updated 9 months ago
- Online tool for comparing prices and feasibility of DNA synthesis☆22Mar 2, 2023Updated 3 years ago
- lncRNA-Py is a development package for applying machine learning and deep learning to the problem of lncRNA classification, i.e. predicti…☆12Jan 24, 2025Updated last year
- Clone with Python! Data structures for double stranded DNA & simulation of homologous recombination, Gibson assembly, cut & paste cloning…☆218Feb 27, 2026Updated last week
- Sequencing analysis pipeline☆15Dec 12, 2025Updated 2 months ago
- Definition of link data for TogoID☆14Updated this week
- General low-level API☆50Jul 18, 2022Updated 3 years ago
- Predict DNA assembly clone validity rates - powered by Kappa☆10Jul 24, 2020Updated 5 years ago
- Electron App for Open Vector Editor☆53Dec 23, 2025Updated 2 months ago
- ☆15Feb 6, 2023Updated 3 years ago
- Computational tools for extremely low-cost, massively parallel amplicon-based sequencing of every variant in protein mutant libraries.☆34Jun 1, 2022Updated 3 years ago
- QC report generator for Hi-C pairs file☆13Sep 14, 2020Updated 5 years ago
- teemi: A Python package for reproducible and FAIR microbial strain construction. Simulate the entire dbtl-cycle, generate genetic parts, …☆43Jan 19, 2026Updated last month
- Short overhangs design for DNA assembly☆15Jun 8, 2022Updated 3 years ago
- A versatile DNA sequence optimizer☆265Nov 5, 2025Updated 4 months ago
- A client for the Ensembl REST API written in the Python programming language☆29Dec 8, 2025Updated 3 months ago
- Parallel Genomic Analysis Toolkit☆14Feb 11, 2019Updated 7 years ago
- An amino acid sequence annotator☆17May 15, 2025Updated 9 months ago
- Models, design algorithms, and other software related to Salis lab publications☆37Nov 6, 2024Updated last year
- Codon usage tables in code-friendly format + Python bindings☆42May 9, 2025Updated 10 months ago
- 🤖 Python biolab automation library: parsers, report generators, picklist simulators, and more☆46May 29, 2025Updated 9 months ago
- Chromatin contact paired-read single-cell Hi-C processing module for Nuc3D and NucTools☆15Sep 15, 2025Updated 5 months ago
- INTERSTELLAR: Interpretation, scalable transformation, and emulation of large-scale sequencing reads☆17May 22, 2024Updated last year
- 🎺 Plot DNA digestion band patterns with Python☆20May 12, 2025Updated 9 months ago
- A library for next generation genomics in Python 3☆18Jun 7, 2018Updated 7 years ago
- Software package to design bridge RNAs as described by Durrant & Perry et al.☆24Sep 25, 2025Updated 5 months ago
- Multiple sequence aligner for protein and DNA/RNA.☆22Jan 3, 2018Updated 8 years ago
- Joint normalization of two Hi-C matrices, visualization and detection of differential chromatin interactions. See multiHiCcompare for the…☆23Jun 4, 2023Updated 2 years ago
- User-affordable and versatile light-sheet microscopy system for cleared specimens☆27Mar 14, 2025Updated 11 months ago
- 🎨 Python library to plot multi-part genetic constructs☆25Apr 9, 2025Updated 11 months ago
- METIS: A versatile active learning workflow for optimization of genetic and metabolic networks☆34Nov 7, 2022Updated 3 years ago
- ☆26Dec 2, 2025Updated 3 months ago
- Software for predicting translation initiation rates in bacteria☆31Jul 30, 2025Updated 7 months ago
- BreakSeq2: Ultrafast and accurate nucleotide-resolution analysis of structural variants☆25Mar 17, 2016Updated 9 years ago
- A Python module to analyze Sanger sequencing results.☆24Dec 6, 2023Updated 2 years ago
- lib310 python package☆23May 24, 2023Updated 2 years ago
- pyPept: a python library to generate atomistic 2D and 3D representations of peptides☆88Nov 5, 2025Updated 4 months ago