QUEEN: a framework to generate quinable and efficiently editable nucleotide sequence resources
☆48May 12, 2026Updated 4 months ago
Alternatives and similar repositories for QUEEN
Users that are interested in QUEEN are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Python library to visualize circular plasmid maps☆27Dec 12, 2021Updated 4 years ago
- sangerseq_viewer is a python package to automatically visualize Sanger sequencing results and the corresponding annotated sequence map.☆42May 27, 2024Updated 2 years ago
- ☆15Feb 6, 2023Updated 3 years ago
- Batch domestication of genetic parts with Python☆16May 12, 2025Updated last year
- ApE- A plasmid Editor☆15Jan 12, 2022Updated 4 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- INTERSTELLAR: Interpretation, scalable transformation, and emulation of large-scale sequencing reads☆17May 22, 2024Updated 2 years ago
- Clone with Python! Data structures for double stranded DNA & simulation of homologous recombination, Gibson assembly, cut & paste cloning…☆231Updated this week
- An Open-Source web application to plan and document cloning and genome engineering☆57Sep 21, 2026Updated last week
- Online tool for comparing prices and feasibility of DNA synthesis☆22Mar 2, 2023Updated 3 years ago
- General low-level API☆51Jul 18, 2022Updated 4 years ago
- ☆15Apr 17, 2025Updated last year
- Electron App for Open Vector Editor☆54Dec 23, 2025Updated 9 months ago
- A collection of open source bioinformatics tools developed and used by Addgene.☆11Jun 25, 2026Updated 3 months ago
- Predict DNA assembly clone validity rates - powered by Kappa☆10Jul 24, 2020Updated 6 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- teemi: A Python package for reproducible and FAIR microbial strain construction. Simulate the entire dbtl-cycle, generate genetic parts, …☆46Apr 27, 2026Updated 5 months ago
- A versatile DNA sequence optimizer☆281Nov 5, 2025Updated 10 months ago
- 🤖 Python biolab automation library: parsers, report generators, picklist simulators, and more☆49May 13, 2026Updated 4 months ago
- lncRNA-Py is a development package for applying machine learning and deep learning to the problem of lncRNA classification, i.e. predicti…☆12Jan 24, 2025Updated last year
- Models, design algorithms, and other software related to Salis lab publications☆38Aug 5, 2026Updated last month
- Web application enabling users and software to browse, upload, and share synthetic biology designs. This repository is a redesign of the …☆16Sep 18, 2026Updated last week
- Preprocessing sequencing data for allele-specific analysis☆13Sep 10, 2026Updated 2 weeks ago
- Short overhangs design for DNA assembly☆15Jun 8, 2022Updated 4 years ago
- Codon usage tables in code-friendly format + Python bindings☆43May 9, 2025Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- An amino acid sequence annotator☆17May 15, 2025Updated last year
- python Circos☆375Jun 14, 2024Updated 2 years ago
- Sequencing analysis pipeline☆16Dec 12, 2025Updated 9 months ago
- DEPRECATED - Teselagen's Open Source Vector/Plasmid Editor Component☆203Jul 28, 2023Updated 3 years ago
- repository-based plasmid design☆32Nov 28, 2022Updated 3 years ago
- QC report generator for Hi-C pairs file☆13Sep 14, 2020Updated 6 years ago
- Teselagen Open Source modules☆106May 22, 2026Updated 4 months ago
- Computational tools for extremely low-cost, massively parallel amplicon-based sequencing of every variant in protein mutant libraries.☆36Jun 1, 2022Updated 4 years ago
- Scripts to design DropSynth oligos☆16Dec 2, 2020Updated 5 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Find common blocks and differences between DNA sequences☆46Nov 5, 2025Updated 10 months ago
- Example notebooks of pyCircos☆29May 17, 2022Updated 4 years ago
- A Python module to analyze Sanger sequencing results.☆28Dec 6, 2023Updated 2 years ago
- Generate robust DNA barcode sets☆33Feb 6, 2024Updated 2 years ago
- pythonic ggplot image combinations https://benjaminleroy.github.io/cowpatch☆10Feb 12, 2023Updated 3 years ago
- Visualise RNA secondary structure in consistent, reproducible and recognisable layouts☆87Sep 13, 2026Updated 2 weeks ago
- A tutorial for the free Inkscape cross-platform vector graphics editor.☆13Oct 4, 2016Updated 9 years ago