yachielab / QUEEN
QUEEN: a framework to generate quinable and efficiently editable nucleotide sequence resources
☆41Updated last week
Alternatives and similar repositories for QUEEN:
Users that are interested in QUEEN are comparing it to the libraries listed below
- A Python project to read and write Snapgene *.dna into dict, json, and biopython object.☆39Updated 4 years ago
- Webserver and command line tool for annotating engineered plasmids☆111Updated 10 months ago
- Codon usage tables in code-friendly format + Python bindings☆35Updated 3 weeks ago
- A route planner for DNA assembly☆31Updated last year
- A PCR primer tool for DNA assembly flows☆30Updated 9 months ago
- a pipeline to build similarity maps of protein space☆31Updated 2 months ago
- MSA(Multiple Sequence Alignment) visualization python package for sequence analysis☆116Updated 2 months ago
- Simple cloning simulator (Golden Gate etc.) for single and combinatorial assemblies☆54Updated last year
- Python library to visualize circular plasmid maps☆22Updated 3 years ago
- Visualise RNA secondary structure in consistent, reproducible and recognisable layouts☆68Updated last week
- Clone with Python! Data structures for double stranded DNA & simulation of homologous recombination, Gibson assembly, cut & paste cloning…☆173Updated this week
- sangerseq_viewer is a python package to automatically visualize Sanger sequencing results and the corresponding annotated sequence map.☆33Updated 8 months ago
- Protein 3D structure prediction pipeline☆70Updated this week
- A Rich renderable for viewing Multiple Sequence Alignments in the terminal.☆79Updated 2 years ago
- 🤖 Python biolab automation library: parsers, report generators, picklist simulators, and more☆43Updated 4 months ago
- snakemake pipeline for creating trees from sequence sets☆73Updated last month
- Python Implementation of Codon Adaption Index☆36Updated 2 years ago
- teemi: A Python package for reproducible and FAIR microbial strain construction. Simulate the entire dbtl-cycle, generate genetic parts, …☆40Updated this week
- Multi-class signal peptide prediction and structure decoding model.☆83Updated 2 weeks ago
- nucleic acid folding☆88Updated 6 months ago
- Nanopore Plasmid Sequencing☆32Updated last year
- An RNA manipulation library.☆54Updated last year
- Models, design algorithms, and other software related to Salis lab publications☆28Updated 3 months ago
- An Open-Source web application to plan and document cloning and genome engineering☆18Updated this week
- General low-level API☆49Updated 2 years ago
- The Ribosome Binding Site (RBS) Calculator can predict the translation initiation rate of a protein coding sequence in bacteria and desig…☆54Updated 9 years ago
- Multiple Protein Structure Alignment at Scale with FoldMason☆154Updated last week
- A Python module to analyze Sanger sequencing results.☆24Updated last year
- Template-based RNA secondary structure visualization☆25Updated 3 months ago
- Degenerate Codon Design☆13Updated 5 years ago