Lattice-Automation / synbioLinks
a DNA assembly library
☆23Updated 5 months ago
Alternatives and similar repositories for synbio
Users that are interested in synbio are comparing it to the libraries listed below
Sorting:
- A PCR primer tool for DNA assembly flows☆33Updated last year
- Simple cloning simulator (Golden Gate etc.) for single and combinatorial assemblies☆64Updated 8 months ago
- Python Implementation of Codon Adaption Index☆37Updated 3 years ago
- Short overhangs design for DNA assembly☆15Updated 3 years ago
- An amino acid sequence annotator☆17Updated 8 months ago
- StrainDesign is a python package for the computational design of metabolic networks and based on COBRApy☆48Updated last month
- A Python package for mapping sequence aligned data onto protein structures☆37Updated 4 years ago
- A route planner for DNA assembly☆36Updated 8 months ago
- 🤖 Python biolab automation library: parsers, report generators, picklist simulators, and more☆46Updated 8 months ago
- The Ribosome Binding Site (RBS) Calculator can predict the translation initiation rate of a protein coding sequence in bacteria and desig…☆61Updated 10 years ago
- Models, design algorithms, and other software related to Salis lab publications☆36Updated last year
- VDJ assignment and antibody sequence annotation. Scalable from a single sequence to billions of sequences.☆44Updated 3 weeks ago
- A Python project to read and write Snapgene *.dna into dict, json, and biopython object.☆45Updated 5 years ago
- nucleic acid folding☆110Updated 5 months ago
- A scalable cloning system☆25Updated 2 years ago
- QUEEN: a framework to generate quinable and efficiently editable nucleotide sequence resources☆45Updated last week
- iCodon customizes gene expression based on the codon composition☆15Updated 2 years ago
- Visualise RNA secondary structure in consistent, reproducible and recognisable layouts☆80Updated last week
- Codon usage tables in code-friendly format + Python bindings☆42Updated 9 months ago
- Automatic oligonucleotide design for PCR-based gene synthesis☆51Updated 2 months ago
- Protein Sequence Annotation with Language Models☆27Updated 2 weeks ago
- Comprehensive Python client for the Uniprot REST API☆55Updated 4 months ago
- An RNA manipulation library.☆56Updated last year
- DNA overhang misannealing data for Python☆13Updated 8 months ago
- Evolutionary conservation estimation of residues or nucleotides☆57Updated 3 years ago
- ☆14Updated 9 years ago
- Create force-directed graphs of RNA secondary structures.☆110Updated 5 years ago
- Multi-class signal peptide prediction and structure decoding model.☆102Updated last year
- A Python wrapper around Clustal Omega (http://www.clustal.org/omega/)☆26Updated 4 years ago
- repository-based plasmid design☆31Updated 3 years ago