Edinburgh-Genome-Foundry / PlateoLinks
π€ Python biolab automation library: parsers, report generators, picklist simulators, and more
β45Updated 6 months ago
Alternatives and similar repositories for Plateo
Users that are interested in Plateo are comparing it to the libraries listed below
Sorting:
- A route planner for DNA assemblyβ36Updated 6 months ago
- Simple cloning simulator (Golden Gate etc.) for single and combinatorial assembliesβ63Updated 6 months ago
- Find common blocks and differences between DNA sequencesβ42Updated last month
- repository-based plasmid designβ29Updated 3 years ago
- π¨ Python library to plot multi-part genetic constructsβ25Updated 8 months ago
- Codon usage tables in code-friendly format + Python bindingsβ40Updated 7 months ago
- Python library for primer-based verification of DNA assemblies: primer selection, data analyis, etc.β33Updated 8 months ago
- Read DNA sequences from colourful Microsoft Word documentsβ34Updated 6 months ago
- General low-level APIβ50Updated 3 years ago
- A python wrapper for the benchling apiβ50Updated 5 years ago
- π« Computer-aided DNA assembly validation and identification from restriction digests.β15Updated 6 months ago
- A PCR primer tool for DNA assembly flowsβ34Updated last year
- Nanopore Plasmid Sequencingβ34Updated 2 years ago
- The Ribosome Binding Site (RBS) Calculator can predict the translation initiation rate of a protein coding sequence in bacteria and desigβ¦β58Updated 10 years ago
- Easily download genomes and build BLAST/Bowtie indexes in Pythonβ22Updated 3 years ago
- nucleic acid foldingβ108Updated 3 months ago
- RNA structure probing and post-transcriptional modifications mapping high-throughput data analysisβ43Updated 3 weeks ago
- DNA overhang misannealing data for Pythonβ13Updated 6 months ago
- QUEEN: a framework to generate quinable and efficiently editable nucleotide sequence resourcesβ45Updated this week
- A package for designing activity-informed nucleic acid diagnostics for viruses.β34Updated 2 years ago
- Python Implementation of Codon Adaption Indexβ37Updated 2 years ago
- Visualise RNA secondary structure in consistent, reproducible and recognisable layoutsβ77Updated 2 weeks ago
- An amino acid sequence annotatorβ16Updated 6 months ago
- Webserver and command line tool for annotating engineered plasmidsβ134Updated 4 months ago
- A Rich renderable for viewing Multiple Sequence Alignments in the terminal.β85Updated 3 years ago
- A pure Python implementation of the SBOL standard.β22Updated 9 months ago
- StrainDesign is a python package for the computational design of metabolic networks and based on COBRApyβ46Updated last month
- A Python project to read and write Snapgene *.dna into dict, json, and biopython object.β44Updated 5 years ago
- Comprehensive Python client for the Uniprot REST APIβ53Updated 2 months ago
- Enzyme-constrained genome-scale models in pythonβ29Updated 2 years ago