Juke34 / awesome-awesomeness-bioinformatics
A curated list of awesome curated lists of awesome softwares and resources in bioinformatics and affiliated areas
☆26Updated this week
Related projects: ⓘ
- genEra is a fast and easy-to-use command-line tool that estimates the age of the last common ancestor of protein-coding gene families.☆46Updated 5 months ago
- SHOOT.bio - the phylogenetic search engine☆24Updated last year
- transXpress: a Snakemake pipeline for streamlined de novo transcriptome assembly and annotation☆24Updated 6 months ago
- NLR annotation tool☆22Updated 6 months ago
- The SYNY pipeline investigates synteny between species by reconstructing protein clusters from gene pairs.☆29Updated last week
- Resources for bioinformatics jobs☆32Updated 7 months ago
- HoCoRT - Remove specific organisms from sequencing reads☆14Updated 11 months ago
- Quantitative analysis of native tRNA populations using direct RNA nanopore sequencing (Lucas*, Pryszcz* et al., Nat Biotech 2023)☆11Updated 8 months ago
- TransPi – a comprehensive TRanscriptome ANalysiS PIpeline for de novo transcriptome assembly☆26Updated 2 years ago
- A program for detection of tRNA genes☆55Updated last year
- A range of different perl scripts for manipulating sequences, conducting alignments, consensus sequences, changing formats☆28Updated last year
- visual analysis of your VCF files☆25Updated last year
- perSVade: personalized Structural Variation detection☆36Updated 3 months ago
- Accurate metagenomi/metatranscriptomic analysis pipeline☆22Updated 3 years ago
- Prediction of apoplastic and cytoplasmic effectors in fungi and oomycetes☆16Updated 2 years ago
- collection of bioinformatic scripts☆30Updated 4 months ago
- Bacterial Genome Assembly and Assessment☆22Updated 2 months ago
- Repository for scripts and resources used for metagenomics with Nanopore, PacBio and Illumina sequencing☆21Updated last year
- PATO is a R package designed to analyze pangenomes (set of genomes) intra or inter species.☆54Updated 11 months ago
- gutSMASH☆51Updated 4 months ago
- A genome annotation pipeline that use short and long sequencing reads alignments from animal genomes☆28Updated 5 months ago
- A tool for representing genomic potential and transcriptomic expression into KEGG pathways☆50Updated last month
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- A fully automated gene annotator from RNA-Seq expression data☆53Updated last year
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- Metagenomics-related extended functionalities to samtools☆18Updated last year
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- create a interactive coverage plot dashboard from bam files and add gb, vcf and bed tracks☆35Updated last month
- hifiasm_meta - de novo metagenome assembler, based on hifiasm, a haplotype-resolved de novo assembler for PacBio Hifi reads.☆60Updated 11 months ago
- PSAURON is a machine learning model for rapid assessment of protein coding gene annotation☆16Updated last month