Alternatives and similar repositories for SeqSizzle

Users that are interested in SeqSizzle are comparing it to the libraries listed below

• luizirber / niffler
  Simple and transparent support for compressed files.
  ☆77Updated 5 months ago
• jguhlin / minimap2-rs
  Rust bindings to minimap2 library
  ☆101Updated 3 weeks ago
• slotThe / rq
  Functional command-line JSON processor with a bidirectional type system
  ☆25Updated 2 months ago
• Euphrasiologist / nu_plugin_bio
  Bioinformatics plugin for nushell.
  ☆30Updated 3 weeks ago
• jeanmanguy / spideog
  🐦 spideog - Command line utility for Kraken2 reports.
  ☆12Updated 4 years ago
• noamteyssier / ggetrs
  Efficient querying of biological databases
  ☆40Updated last week
• Daniel-Liu-c0deb0t / cute-nucleotides
  Cute tricks for SIMD vectorized binary encoding and decoding of nucleotides, in Rust.
  ☆129Updated 4 years ago
• 10XGenomics / rust-toolbox
  Rust utility code
  ☆33Updated last year
• COMBINE-lab / terminus
  ☆58Updated 3 years ago
• onecodex / needletail
  Fast FASTX parsing and k-mer methods in Rust
  ☆195Updated 3 weeks ago
• markschl / seq_io
  FASTA and FASTQ parsing in Rust
  ☆79Updated 4 months ago
• dcjones / coitrees
  A very fast interval tree data structure
  ☆123Updated 6 months ago
• simonpenel / light_phylogeny
  Light phylogeny library for Rust
  ☆10Updated 3 months ago
• rust-bio / rust-bio-tools
  A set of command line utilities based on Rust-Bio.
  ☆198Updated last year
• BioRadOpenSource / ish
  Alignment-based filtering CLI tool
  ☆53Updated 2 weeks ago
• aseyboldt / fastq-rs
  ☆51Updated 2 years ago
• biosustain / shu
  Multi-dimensional, trans-omics metabolic maps.
  ☆49Updated last month
• samuell / gccontent-benchmark
  Benchmarking different languages for a simple bioinformatics task (Counting the GC fraction of DNA in a FASTA file)
  ☆58Updated 2 years ago
• mrkline / piz-rs
  Parallelized zip archive reading
  ☆37Updated 7 months ago
• umccr / htsget-rs
  A server implementation of the htsget protocol for bioinformatics in Rust
  ☆45Updated this week
• SecureDNA / quickdna
  Fast DNA manipulation for Rust and Python
  ☆57Updated 3 months ago
• zaeleus / squab
  Alignment-based gene expression quantification
  ☆29Updated 4 months ago
• wjwei-handsome / Slurmer
  A TUI application for monitoring and managing SLURM jobs.
  ☆76Updated 2 weeks ago
• 38 / d4-format
  The D4 Quantitative Data Format
  ☆166Updated 3 months ago
• stjude-rust-labs / omics
  Foundations for the Rust omics ecosystem.
  ☆11Updated 2 weeks ago
• ocxtal / udon
  BAM CIGAR / MD transcoder for compact on-memory representation and quick drawing
  ☆21Updated 2 years ago
• jakobnissen / alen
  Simple terminal alignment viewer
  ☆83Updated 2 weeks ago
• delehef / fusta
  A FUSE filesystem to browse & edit FASTA files
  ☆18Updated 9 months ago
• stjude-rust-labs / wdl
  Rust crates for working with Workflow Description Language (WDL) documents.
  ☆56Updated this week
• 10XGenomics / rust-pseudoaligner
  Single-Cell RNA-seq pseudo-aligner
  ☆51Updated last year