Euphrasiologist / nu_plugin_bioLinks
Bioinformatics plugin for nushell.
☆30Updated last month
Alternatives and similar repositories for nu_plugin_bio
Users that are interested in nu_plugin_bio are comparing it to the libraries listed below
Sorting:
- Simple terminal alignment viewer☆84Updated last month
- Rust bindings to minimap2 library☆101Updated this week
- ☆16Updated this week
- A bioinformatics workflow engine built on top of the Workflow Description Language (WDL).☆88Updated last week
- Efficient querying of biological databases☆42Updated 3 weeks ago
- Alignment-based filtering CLI tool☆52Updated last month
- FASTA and FASTQ parsing in Rust☆79Updated 5 months ago
- A FUSE filesystem to browse & edit FASTA files☆18Updated 10 months ago
- quickly filter fastq files by matching sequences to a set of regex patterns☆54Updated last month
- Plot numeric lists in Nushell as part of a pipeline☆58Updated 2 months ago
- Fast FASTX parsing and k-mer methods in Rust☆196Updated last month
- Simple and transparent support for compressed files.☆80Updated 6 months ago
- A library of common biomedical types.☆38Updated 4 months ago
- ☆51Updated 2 years ago
- Bit-packed and well-typed biological sequences☆35Updated last month
- Foundations for the Rust omics ecosystem.☆11Updated last month
- Rust crates for working with Workflow Description Language (WDL) documents.☆56Updated this week
- A TUI application for monitoring and managing SLURM jobs.☆80Updated last week
- BAM CIGAR / MD transcoder for compact on-memory representation and quick drawing☆21Updated 2 years ago
- A high efficiency binary format for sequencing data☆69Updated 2 months ago
- Build and deploy cross platform bioinformatic utilities with Rust.☆19Updated 5 months ago
- A set of command line utilities based on Rust-Bio.☆199Updated last year
- Alignment-based gene expression quantification☆29Updated last week
- Parallel Construction of Suffix Arrays in Rust☆26Updated 3 months ago
- A command line utilty for working with BINSEQ files☆23Updated last week
- protein utilities in Rust☆30Updated 2 months ago
- Light phylogeny library for Rust☆10Updated 4 months ago
- Lint Nextflow pipelines in Python.☆11Updated 7 months ago
- Faultless AST for Open Biomedical Ontologies.☆30Updated 6 months ago
- Generate random test data for bioinformatics☆26Updated last year