Alternatives and similar repositories for nu_plugin_bio

Users that are interested in nu_plugin_bio are comparing it to the libraries listed below

• jguhlin / minimap2-rs
  Rust bindings to minimap2 library
  ☆101Updated 2 weeks ago
• ChangqingW / SeqSizzle
  ☆16Updated 3 weeks ago
• jakobnissen / alen
  Simple terminal alignment viewer
  ☆83Updated last month
• stjude-rust-labs / sprocket
  A bioinformatics workflow engine built on top of the Workflow Description Language (WDL).
  ☆90Updated this week
• Euphrasiologist / nu_plugin_plot
  Plot numeric lists in Nushell as part of a pipeline
  ☆60Updated 3 months ago
• markschl / seq_io
  FASTA and FASTQ parsing in Rust
  ☆78Updated 6 months ago
• MatteoGaetzner / mini-mcmc
  A compact MCMC library in Rust with optional GPU support.
  ☆16Updated 3 months ago
• noamteyssier / ggetrs
  Efficient querying of biological databases
  ☆42Updated last month
• rust-bio / rust-bio-types
  A library of common biomedical types.
  ☆39Updated 5 months ago
• stjude-rust-labs / wdl
  Rust crates for working with Workflow Description Language (WDL) documents.
  ☆57Updated this week
• onecodex / needletail
  Fast FASTX parsing and k-mer methods in Rust
  ☆196Updated 2 months ago
• Rbfinch / grepq
  quickly filter fastq files by matching sequences to a set of regex patterns
  ☆53Updated 2 months ago
• aseyboldt / fastq-rs
  ☆50Updated 3 years ago
• delehef / fusta
  A FUSE filesystem to browse & edit FASTA files
  ☆18Updated 11 months ago
• BioRadOpenSource / ish
  Alignment-based filtering CLI tool
  ☆52Updated last month
• luizirber / niffler
  Simple and transparent support for compressed files.
  ☆80Updated 7 months ago
• wjwei-handsome / Slurmer
  A TUI application for monitoring and managing SLURM jobs.
  ☆83Updated last week
• ferritin-bio / ferritin
  protein utilities in Rust
  ☆31Updated 3 months ago
• rust-bio / rust-bio-tools
  A set of command line utilities based on Rust-Bio.
  ☆198Updated last year
• stjude-rust-labs / omics
  Foundations for the Rust omics ecosystem.
  ☆11Updated this week
• umccr / htsget-rs
  A server implementation of the htsget protocol for bioinformatics in Rust
  ☆45Updated this week
• ocxtal / udon
  BAM CIGAR / MD transcoder for compact on-memory representation and quick drawing
  ☆20Updated 2 years ago
• biosustain / shu
  Multi-dimensional, trans-omics metabolic maps.
  ☆50Updated 3 months ago
• ArcInstitute / binseq
  A high efficiency binary format for sequencing data
  ☆74Updated this week
• zeqianli / tgv
  Explore genomes in the terminal. Light, blazing fast 🚀, vim-motion.
  ☆403Updated last week
• jeff-k / bio-seq
  Bit-packed and well-typed biological sequences
  ☆35Updated 2 weeks ago
• TravisWheelerLab / sufr
  Parallel Construction of Suffix Arrays in Rust
  ☆26Updated 4 months ago
• PapenfussLab / bionix
  Functional highly reproducible bioinformatics pipelines
  ☆89Updated 6 months ago
• ArcInstitute / bqtools
  A command line utilty for working with BINSEQ files
  ☆23Updated this week
• simonpenel / light_phylogeny
  Light phylogeny library for Rust
  ☆10Updated 4 months ago