delt0r / msms

Related projects ⓘ

Alternatives and complementary repositories for msms

• kr-colab / shIC
  The Soft/Hard Inference through Classification tool for detecting hard and soft selective sweeps
  ☆14Updated 3 years ago
• CMPG / signet
  An R package to detect selection in biological pathways
  ☆14Updated 10 months ago
• LynchLab / MAPGD
  A program for the Maximum-likelihood analysis of population genomic data.
  ☆28Updated 3 years ago
• devillemereuil / bayescenv
  BayeScEnv is a Fst-based, genome-scan method that uses environmental variables to detect local adaptation.
  ☆19Updated 7 years ago
• AgResearch / KGD
  Kinship (genetic relatedness) using GBS (genotyping-by-sequencing) with Depth adjustment
  ☆21Updated 3 months ago
• popsim-consortium / analysis
  Analysis of inference methods on standard population models
  ☆25Updated 2 years ago
• bcm-uga / lfmm
  Fitting latent factor mixed models
  ☆12Updated 4 years ago
• jjberg2 / PolygenicAdaptationCode
  ☆20Updated 4 years ago
• timbeissinger / Maize-Teo-Scripts
  ☆17Updated 8 years ago
• LohmuellerLab / fitdadi
  Tools for inference of the DFE with dadi
  ☆14Updated 3 years ago
• NovembreLab / eems-around-the-world
  Repo to analyze population genetic data with many different methods
  ☆15Updated 5 years ago
• fgvieira / ngsF-HMM
  Estimation of per-individual inbreeding tracts under a probabilistic framework
  ☆13Updated last year
• mfumagalli / ngsPopGen
  Population genetics analyses from NGS data
  ☆25Updated 3 years ago
• mailund / admixture_graph
  Module for analysing admixture graphs
  ☆28Updated 6 years ago
• sriramlab / ArchIE
  A statistical framework for reference-free inference of archaic local ancestry
  ☆15Updated 5 years ago
• champost / ABLE
  ABLE - Approximate Blockwise Likelihood Estimation
  ☆17Updated 6 years ago
• weissmanlab / magic
  Minimal Assumption Genomic Inference of Coalescence
  ☆14Updated last year
• CshlSiepelLab / argweaver
  Sampling and manipulating genome-wide ancestral recombination graphs (ARGs)
  ☆13Updated last year
• Rosemeis / HaploNet
  Haplotype and population structure inference using neural networks.
  ☆26Updated 3 months ago
• ulasisik / balancing-selection
  ☆13Updated 3 years ago
• hemstrow / snpR
  ☆28Updated 2 weeks ago
• mojaveazure / angsd-wrapper
  Utilities for analyzing next generation sequencing data
  ☆17Updated 6 years ago
• ryhui / imputation-pipeline
  ☆10Updated 4 years ago
• MyersGroup / relate
  Software for estimating genome-wide genealogies for thousands of samples
  ☆28Updated last month
• millanek / fineRADstructure
  A package for population structure inference from RAD-seq data
  ☆31Updated 3 years ago
• singhal / popgen_tutorial
  ☆11Updated 5 years ago
• augusto-garcia / onemap
  Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and b…
  ☆35Updated 10 months ago
• PhHermann / LDJump
  R Package to Estimate Variable Recombination Rates using Population Genetic Data
  ☆39Updated 5 years ago
• ngthomas / microhaplot
  microhaplotype visualizer and analyzer
  ☆18Updated 3 years ago
• JiscaH / sequoia
  R package for pedigree inference based on SNP data
  ☆26Updated 5 months ago