reComBat package to correct batch effects
☆13Jul 17, 2023Updated 3 years ago
Alternatives and similar repositories for reComBat
Users that are interested in reComBat are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Python implementation of Combat for data harmonisation, allowing also to remove unwanted effects☆16Oct 30, 2023Updated 2 years ago
- RAxML Next Generation: faster, easier-to-use and more flexible☆10Mar 26, 2026Updated 5 months ago
- Microbiome Analysis Plotting and Visualization☆12Updated this week
- gNOMO2 allows integrated multi-omics analyses of microbiomes☆15Aug 7, 2024Updated 2 years ago
- This is the BWA workflow used in the PanCancer project used to allign all the BAM files.☆11Dec 27, 2022Updated 3 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Reworked clustering metrics for assessing performance in imbalanced settings☆18Jun 3, 2024Updated 2 years ago
- Automated processing of Sanger sequencing data, taxonomic profiling, and generation of microbial strain libraries☆19Jan 4, 2026Updated 7 months ago
- ☆22Jan 6, 2024Updated 2 years ago
- pyComBat is a Python 3 implementation of ComBat, one of the most widely used tool for correcting technical biases, called batch effects, …☆90Feb 24, 2024Updated 2 years ago
- Geometry Regularized Autoencoders (GRAE) for large-scale visualization and manifold learning☆26Dec 15, 2023Updated 2 years ago
- Richard @rdgao & Michael @michaeldeistler: using neural network-based regression and density estimation for Generalized Bayesian Inferenc…☆11Dec 19, 2025Updated 8 months ago
- Variant catalogue pipeline☆26Jan 30, 2026Updated 7 months ago
- an efficient data integration method for multiple spatial transcriptomics data with non- cluster-relevant effects such as the complex batc…☆16Dec 15, 2025Updated 8 months ago
- A python package for the automatic conversion of EEG datasets to the BIDS standard, with a focus on making the most out of metadata.☆13Aug 20, 2026Updated last week
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- 🧠 Data-driven head model individualization from digitized electrode positions or photogrammetry for improved M/EEG source localization a…☆17Jul 22, 2026Updated last month
- Probabilistic factor models for spatially correlated data. Includes nonnegative and real-valued versions.☆20Dec 5, 2024Updated last year
- ☆18Apr 11, 2021Updated 5 years ago
- EEG/MEG data preprocessing and analyses framework☆13May 2, 2022Updated 4 years ago
- A straightforward bioinformatic pipeline for detecting a bacterial strain in one or more metagenome(s).☆19Jul 10, 2018Updated 8 years ago
- R package for gene selection using k-NN graphs.☆15Jun 12, 2023Updated 3 years ago
- Demo on chaining together LFP simulation (neurodsp), spectral parameterization (fooof), and simulation-based inference (sbi).☆13Jul 8, 2025Updated last year
- MERFISH decoding software☆29Aug 16, 2025Updated last year
- HiDimStat: High-dimensional statistical inference tool for Python☆46Updated this week
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Feature selection for tabular datasets using advanced filter and wrapper methods☆19Mar 9, 2025Updated last year
- Semantic Search☆34Updated this week
- Digital Biomarkers for Parkinson's Disease Toolbox.☆17Aug 17, 2026Updated last week
- Rockfest is a responsive, well-designed, website template for music events, concerts, festivals, night club, built with modern technologi…☆11Feb 28, 2023Updated 3 years ago
- (CVPR24) Riemannian Multinomial Logistics Regression for SPD Neural Networks☆15Feb 5, 2025Updated last year
- A novel method for single-cell diagonal integration: scConfluence☆28Nov 3, 2025Updated 9 months ago
- Code for spectral analysis of EEG using Morlet wavelets based on the frequency-based parametrization presented in [Bomatter et al 2024, e…☆18Aug 6, 2024Updated 2 years ago
- ☆11Aug 3, 2018Updated 8 years ago
- A guide to using NYU's high performance computing (for NYU students/staff)☆15Nov 20, 2019Updated 6 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Stable diffusion google colab kernel☆11Aug 17, 2022Updated 4 years ago
- CDbw Index For Cluster Validation☆10Mar 26, 2019Updated 7 years ago
- A scheduler to manage a multi tool dual arm robot while avoiding arm-to-arm collisions; considering complex side constraints; and optimiz…☆11Jul 6, 2021Updated 5 years ago
- BMSC-GA 4493 Deep Learning in Medicine - Spring 2019☆16Apr 29, 2019Updated 7 years ago
- LieSL is a collection of modules to read and process labstreaminglayer streams on the fly☆15Jun 13, 2023Updated 3 years ago
- A toolkit for NGS analysis with Python☆14Jan 18, 2023Updated 3 years ago
- ☆12May 21, 2025Updated last year