gregbellan / StablLinks
☆68Updated last year
Alternatives and similar repositories for Stabl
Users that are interested in Stabl are comparing it to the libraries listed below
Sorting:
- scAR (single-cell Ambient Remover) is a deep learning model for removal of the ambient signals in droplet-based single cell omics☆57Updated last year
- Fast Gene Set Enrichment Analysis (GSEA) implementation of the prerank algorithm. Use Loess interpolation of bimodal ES distribution for …☆59Updated 8 months ago
- Collection of Tumor-Infiltrating Lymphocyte Single-Cell Experiments with TCR☆104Updated last month
- Geometry-preserving random sampling☆95Updated last year
- Gene regulatory network containing signed transcription factor-target gene interactions☆97Updated 8 months ago
- Unified access to several second-generation deconvolution methods☆91Updated last month
- ☆62Updated 8 months ago
- Latent Embedding Multivariate Regression☆98Updated last year
- CAusal Reasoning for Network Identification with integer VALue programming in R☆61Updated 2 years ago
- Single cell omics biology annotations☆53Updated 9 months ago
- Work with trained factor models in Python☆36Updated last year
- ☆61Updated 4 years ago
- AnnData interoperability in R☆149Updated this week
- Annotated multivariate observation data in R☆52Updated 8 months ago
- Toolkit for highly memory efficient analysis of single-cell RNA-Seq, scATAC-Seq and CITE-Seq data. Analyze atlas scale datasets with mill…☆111Updated 2 months ago
- Context specific and dynamic gene regulatory network reconstruction and analysis☆127Updated 2 months ago
- Multi-omics factor analysis v2☆56Updated last week
- Cellxgene Gateway allows you to use the Cellxgene Server provided by the Chan Zuckerberg Institute (https://github.com/chanzuckerberg/cel…☆67Updated 2 months ago
- Decima is a Python library to train sequence models on single-cell RNA-seq data.☆62Updated last week
- R package for Pathway RespOnsive GENe activity inference☆114Updated 3 years ago
- ☆96Updated 5 years ago
- From geospatial to spatial -omics☆100Updated this week
- ☆44Updated last year
- Clonotype Neighbor Graph Analysis☆95Updated 5 months ago
- This is a tutorial to guide the analysis of RNAseq dataset using footprint based tools such as DOROTHEA, PROGENY and CARNIVAL☆56Updated 2 years ago
- Single sample Gene Set Enrichment analysis (ssGSEA) and PTM Enrichment Analysis (PTM-SEA)☆12Updated 3 years ago
- Multi-agent LLM driven cell type annotation for single-cell RNA-Seq data☆102Updated 3 weeks ago
- Quasilinear data representations for single-cell omics data analysis☆43Updated 2 years ago
- A docker image for single-cell analysis☆103Updated 3 months ago
- scDesign3 generates realistic in silico data for multimodal single-cell and spatial omics☆113Updated 4 months ago