GUI for creating bioinformatics workflows from Docker containers:
☆66Oct 3, 2026Updated 3 weeks ago
Alternatives and similar repositories for BioDepot-workflow-builder
Users that are interested in BioDepot-workflow-builder are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Convert CWL to WDL☆17Oct 17, 2016Updated 10 years ago
- Website about the project WorkflowHub☆14Aug 21, 2026Updated 2 months ago
- a place for GA4GH-related wiki pages☆17Aug 3, 2017Updated 9 years ago
- ☆11Apr 6, 2021Updated 5 years ago
- Using GitHub and Binder to share Jupyter Notebooks, statically and interactively☆10Aug 9, 2024Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Web-based User Interface to run WDL bioinformatics workflows using Cromwell server☆13Aug 28, 2024Updated 2 years ago
- Comprehensive resistance detection from WGS data☆22Sep 4, 2026Updated last month
- A rust wrapper for the spoa C++ partial order alignment library☆10Jun 11, 2025Updated last year
- Import a CWL workflow specification to Nextflow script (experimental)☆27Aug 9, 2018Updated 8 years ago
- A Jupyter Notebook extension for Docker☆15Sep 2, 2019Updated 7 years ago
- Manage HuggingFace models with Python desktop app☆11Jul 7, 2023Updated 3 years ago
- SRA python tools☆11Jun 9, 2021Updated 5 years ago
- Using combined evidence from replicates to evaluate ChIP-seq peaks☆22Mar 14, 2026Updated 7 months ago
- A pipeline for making SWIft Genomes in a Graph (SWIGG) using k-mers☆22Nov 22, 2019Updated 6 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- ☆13Jun 22, 2017Updated 9 years ago
- Command line client and Python libraries for CosmosID API☆13Oct 28, 2025Updated last year
- ARCH i2b2 PCORnet Ontology☆14May 1, 2019Updated 7 years ago
- ☆11May 14, 2025Updated last year
- CWL CommandLineTool descriptions for biology/life-sciences related applications☆81Mar 25, 2025Updated last year
- Oxford Nanopore HDF/Fast5 to CRAM conversion tool☆22Dec 30, 2019Updated 6 years ago
- Host depletion optimised for clinical metagenomic sequencing applications☆19Jul 9, 2026Updated 3 months ago
- Base-pair resolution detection of transcription factor binding site by deep deconvolutional network☆11Sep 12, 2017Updated 9 years ago
- PCA and normal mode analysis of proteins☆21May 16, 2024Updated 2 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Request for comments on interchangeable bioinformatics containers☆39Jun 18, 2019Updated 7 years ago
- Hybrid Assembler for Plasmids☆10Jul 28, 2022Updated 4 years ago
- Design and implementation of FAIR Data Cube☆12Jun 2, 2025Updated last year
- A FUSE interface to the NCBI Sequence Read Archive (SRA)☆31Jan 29, 2020Updated 6 years ago
- ☆11Dec 31, 2021Updated 4 years ago
- evaluating vcf parsing libraries☆19Mar 1, 2022Updated 4 years ago
- Whole Genome Sequenceing Structural Variation Pipelines☆18Apr 4, 2019Updated 7 years ago
- ☆18Jan 29, 2025Updated last year
- Software for processing molecular barcoding (UMI)-based NGS data☆10May 22, 2020Updated 6 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Course Materials for the MMCi Practical Data Science Course☆19Apr 10, 2020Updated 6 years ago
- galaxydock_dl for public☆11Dec 22, 2024Updated last year
- MineYourSymbiont : Targetted genome assembly for metagenomics pipeline.☆10Mar 3, 2023Updated 3 years ago
- scripts for analysis associated with Cas9Enrichment publication☆12Feb 10, 2020Updated 6 years ago
- The MLST pipeline developed by the PathOGiST research group☆39Nov 29, 2023Updated 2 years ago
- Code for doing MIC predictions on genomes☆42Dec 5, 2019Updated 6 years ago
- ☆16Sep 20, 2019Updated 7 years ago