Alternatives and similar repositories for BioDepot-workflow-builder:

Users that are interested in BioDepot-workflow-builder are comparing it to the libraries listed below

• PapenfussLab / PathOS
  PathOS is a clinical application for filtering, analysing and reporting on NGS variants
  ☆28Updated 4 years ago
• lgautier / fastq-and-furious
  Efficient handling of FASTQ files from Python
  ☆51Updated 6 months ago
• ga4gh / vrs-python
  GA4GH Variation Representation Python Implementation
  ☆53Updated last week
• NCBI-Hackathons / SPeW
  Automatic Packaging and Distribution of Bioinformatics Pipelines
  ☆26Updated 7 years ago
• ewels / clusterflow
  A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.
  ☆97Updated last year
• genepattern / genepattern-server
  The GenePattern Server web application
  ☆36Updated 3 weeks ago
• DataBiosphere / job-manager
  Job Manager API and UI for interacting with asynchronous batch jobs and workflows.
  ☆26Updated last week
• dnanexus / dxWDL
  Workflow Description Language compiler for the DNAnexus platform
  ☆40Updated last year
• NCBI-Hackathons / Community_Software_Tools_for_NGS
  ☆62Updated 8 years ago
• ncbi / magicblast
  ☆36Updated this week
• galaxyproject / admin-training
  Galaxy Admin Training
  ☆61Updated 3 months ago
• jdrudolph / goenrich
  GO enrichment with python -- pandas meets networkx
  ☆87Updated 4 years ago
• liyao001 / BioQueue
  A novel pipeline framework to accelerate bioinformatics analysis
  ☆29Updated 2 years ago
• LANL-Bioinformatics / EDGE
  EDGE is a highly adaptable bioinformatics platform that allows laboratories to quickly analyze and interpret genomic sequence data.
  ☆73Updated 2 weeks ago
• ncbi / pm4ngs
  Project Manager for NGS data analysis
  ☆30Updated 2 years ago
• gogetdata / ggd-recipes
  conda recipes for genomic data
  ☆85Updated 3 years ago
• sbg / sevenbridges-python
  SevenBridges Python Api bindings
  ☆46Updated last month
• 4dn-dcic / tibanna
  Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integr…
  ☆69Updated 4 months ago
• biobuilds / biobuilds
  Curated collection of open-source bioinformatics tools
  ☆28Updated 6 years ago
• roryk / tiny-test-data
  Super small biological datasets for unit testing
  ☆60Updated 5 years ago
• workflux / workflUX
  An open-source, cloud-ready web application for simplified deployment of big data workflows.
  ☆33Updated 8 months ago
• stjudecloud / workflows
  Bioinformatics workflows developed for and used on the St. Jude Cloud project.
  ☆36Updated last week
• Steven-N-Hart / vcf-miner
  VCF-Miner: A graphical user interface for sorting, filtering and querying annotated VCF Files
  ☆37Updated 5 years ago
• panoptes-organization / panoptes
  Monitor computational workflows in real time
  ☆71Updated 10 months ago
• common-workflow-library / bio-cwl-tools
  CWL CommandLineTool descriptions for biology/life-sciences related applications
  ☆78Updated this week
• bioinfo-pf-curie / geniac
  Automatic Configuration GENerator and Installer for nextflow pipeline. This is a set of utilities to implement the best practises for th…
  ☆8Updated 2 months ago
• johandahlberg / awesome-10x-genomics
  List of tools and resources related to the 10x Genomics GEMCode/Chromium system
  ☆84Updated 6 years ago
• vatlab / varianttools
  software tool for the manipulation, annotation, selection, and analysis of variants in the context of next-gen sequencing analysis
  ☆31Updated 3 years ago
• maximilianh / crisporPaper
  Code for the CRISPOR article, all data and code to create figures and analysis
  ☆40Updated 8 years ago
• bcgsc / orca
  Genomics Research Container Architecture
  ☆48Updated 5 years ago