galaxyproject / bioblendLinks
A Python library for interacting with the Galaxy API
☆93Updated last week
Alternatives and similar repositories for bioblend
Users that are interested in bioblend are comparing it to the libraries listed below
Sorting:
- Command-line utilities to assist in developing Galaxy and Common Workflow Language artifacts - including tools, workflows, and training m…☆96Updated this week
- Galaxy Workflows maintained by the Intergalactic Workflow Commission☆40Updated this week
- Extensible specification for representing and uniquely identifying biological sequence variation☆88Updated 2 months ago
- ENA upload tool - script your Open Data upload to the European Nucleotide Archive☆29Updated this week
- GA4GH Variation Representation Python Implementation☆57Updated this week
- Handy command line utility for Galaxy administrators☆23Updated 3 months ago
- Collect of SO Ontologies☆100Updated 7 months ago
- List of tools included in https://usegalaxy.eu☆32Updated this week
- Java library that models biological entities and their equivalents in different file formats typically used in bioinformatics. Found a bu…☆30Updated this week
- Utilities for building and managing bioconda recipes☆102Updated last week
- Galaxy Admin Training☆61Updated 6 months ago
- EDAM is a domain ontology of data analysis and data management in bio- and other sciences, and science-based applications. It comprises c…☆123Updated last month
- Testing building mulled containers for multi-requirement tools.☆75Updated this week
- Extension for Jupyter which integrates igv.js☆154Updated 2 years ago
- Example Nextflow pipelines and programming techniques☆107Updated last month
- biotoolsSchema : Tool description data model for computational tools in life sciences☆38Updated last year
- [Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows☆43Updated last year
- An information model for representing variant annotations.☆19Updated 2 weeks ago
- Collection of scripts for automated SARS-CoV-2 genome surveillance.☆24Updated last year
- Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integr…☆69Updated 2 months ago
- UseGalaxy.EU website (compiled version https://github.com/usegalaxy-eu/usegalaxy-eu.github.io)☆20Updated last week
- Universal Transcript Archive: comprehensive genome-transcript alignments; multiple transcript sources, versions, and alignment methods; a…☆65Updated 2 months ago
- A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.☆97Updated 2 years ago
- Galaxy Communities Dock aka Galaxy Codex: catalog of Galaxy resources (tools, training, workflows)☆22Updated this week
- python access to UCSC genomes database☆135Updated 4 years ago
- Python biomart API☆65Updated 2 years ago
- Sequana: a set of Snakemake NGS pipelines☆146Updated 3 months ago
- VarSim: A high-fidelity simulation validation framework for high-throughput genome sequencing with cancer applications☆84Updated 8 months ago
- NGS Language Bindings☆119Updated last year
- transparently build CWL and Galaxy XML tool definitions for any script that uses argparse☆27Updated 7 months ago