Alternatives and similar repositories for bioblend:

Users that are interested in bioblend are comparing it to the libraries listed below

• ga4gh / vrs-python
  GA4GH Variation Representation Python Implementation
  ☆53Updated this week
• galaxyproject / iwc
  Galaxy Workflows maintained by the Intergalactic Workflow Commission
  ☆33Updated this week
• galaxyproject / planemo
  Command-line utilities to assist in developing Galaxy and Common Workflow Language artifacts - including tools, workflows, and training m…
  ☆91Updated this week
• opencb / biodata
  Java library that models biological entities and their equivalents in different file formats typically used in bioinformatics. Found a bu…
  ☆30Updated last week
• usegalaxy-eu / ena-upload-cli
  ENA upload tool - script your Open Data upload to the European Nucleotide Archive
  ☆28Updated 3 weeks ago
• ga4gh / vrs
  Extensible specification for representing and uniquely identifying biological sequence variation
  ☆86Updated this week
• The-Sequence-Ontology / SO-Ontologies
  Collect of SO Ontologies
  ☆99Updated 3 months ago
• bioconda / bioconda-utils
  Utilities for building and managing bioconda recipes
  ☆99Updated 2 weeks ago
• usegalaxy-eu / usegalaxy-eu-tools
  List of tools included in https://usegalaxy.eu
  ☆26Updated this week
• LANL-Bioinformatics / EDGE
  EDGE is a highly adaptable bioinformatics platform that allows laboratories to quickly analyze and interpret genomic sequence data.
  ☆73Updated last week
• galaxyproject / admin-training
  Galaxy Admin Training
  ☆60Updated 3 months ago
• gogetdata / ggd-recipes
  conda recipes for genomic data
  ☆85Updated 3 years ago
• bioinform / varsim
  VarSim: A high-fidelity simulation validation framework for high-throughput genome sequencing with cancer applications
  ☆81Updated 5 months ago
• bio-tools / biotoolsSchema
  biotoolsSchema : Tool description data model for computational tools in life sciences
  ☆37Updated last year
• mgalardini / pyseer
  SEER, reimplemented in python 🐍🔮
  ☆120Updated 4 months ago
• bio-tools / ToolDog
  Generating tool descriptors from bio.tools
  ☆9Updated 6 years ago
• ewels / clusterflow
  A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.
  ☆97Updated last year
• SGBC / galaksio
  An easy-to-use way for running Galaxy workflows.
  ☆20Updated 5 years ago
• biocommons / biocommons.seqrepo
  non-redundant, compressed, journalled, file-based storage for biological sequences
  ☆40Updated last week
• jwintersinger / kablammo
  Interactive, web-based BLAST results visualization tool. Accessible at https://kablammo.wasmuthlab.org.
  ☆66Updated 2 years ago
• BioContainers / multi-package-containers
  Testing building mulled containers for multi-requirement tools.
  ☆71Updated this week
• ga4gh / va-spec
  An information model for representing variant annotations.
  ☆18Updated this week
• charite / jannovar
  Annotation of VCF variants with functional impact and from databases (executable+library)
  ☆59Updated last week
• biocommons / uta
  Universal Transcript Archive: comprehensive genome-transcript alignments; multiple transcript sources, versions, and alignment methods; a…
  ☆63Updated last month
• mdshw5 / fastqp
  Simple FASTQ quality assessment using Python
  ☆109Updated 3 years ago
• edamontology / edamontology
  EDAM is a domain ontology of data analysis and data management in bio- and other sciences, and science-based applications. It comprises c…
  ☆121Updated last week
• galaxyproject / gxadmin
  Handy command line utility for Galaxy administrators
  ☆23Updated this week
• personalis / hgvslib
  hgvslib provides functions to parse and compare the equivalency of variant strings described according to Human Genome Variation Society …
  ☆18Updated 2 years ago
• Clinical-Genomics / genmod
  Annotate models of genetic inheritance patterns in variant files (vcf files)
  ☆79Updated last week
• usegalaxy-eu / ena-cog-uk-wfs
  Collection of scripts for automated SARS-CoV-2 genome surveillance.
  ☆22Updated last year