research-software-ecosystem / contentLinks
A metadata commons to store research software metadata
☆44Updated this week
Alternatives and similar repositories for content
Users that are interested in content are comparing it to the libraries listed below
Sorting:
- Project Manager for NGS data analysis☆30Updated 2 months ago
- A Python package for gene network analysis☆32Updated 3 years ago
- MetaSRA: normalized sample-specific metadata for the Sequence Read Archive☆45Updated last week
- ☆19Updated 3 years ago
- Workflow management with Nextflow and nf-core☆27Updated 10 months ago
- GOMCL: a toolkit to cluster, evaluate, and extract non-redundant associations of Gene Ontology-based functions☆22Updated 2 years ago
- Universal RObust Peak Annotator☆16Updated last year
- predicts neoepitopes from phased somatic mutations detected using tumor/normal DNA-seq data☆27Updated 2 years ago
- This repository contains Jupyter Notebooks containing GATK Best Practices Workflows☆26Updated 5 years ago
- Functional Associations using Variational Autoencoders☆40Updated 3 weeks ago
- Comparison of Adaptive Immune Receptor Repertoires☆28Updated 10 months ago
- ☆42Updated 7 years ago
- programs and scripts, mainly python, for analyses related to nucleic or protein sequences☆24Updated last month
- Extension of the WGCNA program to improve the eigengene similarity of modules and increase the overall number of genes in modules.☆66Updated 4 years ago
- Data visualization and analysis framework focused on phenotype-molecular data integration at cohort level.☆41Updated last week
- Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)☆27Updated 3 years ago
- RNA-seq data comprehensive data analysis toolbox☆19Updated 3 years ago
- A web-based application to perform Over-Representation Analysis (ORA) using clusterProfiler and shiny R libraries☆12Updated 5 years ago
- A phenotype-based tool for variant prioritization in WES and WGS data☆39Updated 3 years ago
- deepStats: a stastitical toolbox for deeptools and genomic signals☆35Updated 4 years ago
- 🧬 MSABrowser: dynamic and fast visualization of sequence alignments, variations, and annotations☆35Updated last year
- Automatic Packaging and Distribution of Bioinformatics Pipelines☆26Updated 8 years ago
- Biological Graphic tool in Python☆34Updated 5 years ago
- Fine-mapping pipeline for Open Targets Genetics☆27Updated 3 years ago
- Learning resources originally for a class held December 2020 "Dry bench skills for Researchers". Expanding based upon mini-courses.☆11Updated 3 years ago
- IPAW: a Nextflow workflow for proteogenomics☆28Updated last year
- Tool package to perform in-silico CRISPR analysis and assessment☆34Updated 2 weeks ago
- A package for designing activity-informed nucleic acid diagnostics for viruses.☆34Updated 2 years ago
- script + metadata = standalone component☆44Updated this week
- Repo for downloading and storing OMIM data☆19Updated 9 years ago