Alternatives and similar repositories for content

Users that are interested in content are comparing it to the libraries listed below

• NLM-DIR / pm4ngs
  Project Manager for NGS data analysis
  ☆30Updated last week
• stracquadaniolab / pygna
  A Python package for gene network analysis
  ☆32Updated 3 years ago
• ISCB-Academy / Elements-of-Style-Reproducible-Workflow-Creation-Maintenance-Tutorial
  ☆19Updated 3 years ago
• lwgray / pyEntrezId
  Converts Ensembl, Uniprot, and HGNC IDs to Entrez Gene Id
  ☆47Updated 2 years ago
• bio-ontology-research-group / phenomenet-vp
  A phenotype-based tool for variant prioritization in WES and WGS data
  ☆41Updated 3 years ago
• ebi-uniprot / ProtVista
  A BioJS viewer for protein sequence features
  ☆53Updated 3 years ago
• GuipengLi / SharePathway
  a python package for KEGG pathway enrichment analysis with multiple gene lists.
  ☆38Updated 8 years ago
• babelomics / babelomics
  ☆42Updated 7 years ago
• uio-bmi / compairr
  Comparison of Adaptive Immune Receptor Repertoires
  ☆28Updated last year
• nf-core / mhcquant
  Identify and quantify MHC eluted peptides from mass spectrometry raw data
  ☆43Updated this week
• carpentries-incubator / workflows-nextflow
  Workflow management with Nextflow and nf-core
  ☆28Updated last year
• kundajelab / coessentiality
  Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)
  ☆27Updated 3 years ago
• jbloomlab / dmslogo
  draw sequence logos tailored to deep mutational scanning (DMS) data
  ☆12Updated 2 years ago
• broadinstitute / adapt
  A package for designing activity-informed nucleic acid diagnostics for viruses.
  ☆35Updated 2 years ago
• ebiwd / EBI-Icon-fonts
  A collection of functional and scientific icons for EMBL-EBI sites.
  ☆17Updated 5 years ago
• CancerRxGene / gdsctools
  Tools related to the Genomics of Drug Sensitivity in Cancer (GDSC) projects (http://www.cancerrxgene.org/ )
  ☆36Updated 4 years ago
• Guannan-Wang / GOMCL
  GOMCL: a toolkit to cluster, evaluate, and extract non-redundant associations of Gene Ontology-based functions
  ☆22Updated 2 years ago
• EBIvariation / CMAT
  ClinVar Mapping and Annotation Toolkit
  ☆20Updated last week
• fomightez / sequencework
  programs and scripts, mainly python, for analyses related to nucleic or protein sequences
  ☆24Updated 3 months ago
• thekaplanlab / msabrowser
  🧬 MSABrowser: dynamic and fast visualization of sequence alignments, variations, and annotations
  ☆35Updated last year
• databio2022 / GraphBio
  GraphBio: a shiny web app to easily perform popular visualization analysis for omics data
  ☆33Updated 2 years ago
• cstoeckert / iterativeWGCNA
  Extension of the WGCNA program to improve the eigengene similarity of modules and increase the overall number of genes in modules.
  ☆66Updated 4 years ago
• bio-tools / biotoolsRegistry
  biotoolsregistry: discovery portal for bioinformatics
  ☆82Updated 2 weeks ago
• vagarwal87 / Xpresso
  Predicting gene expression levels from genomic sequences
  ☆54Updated 5 years ago
• openvax / topiary
  Predict mutated T-cell epitopes from sequencing data
  ☆30Updated 11 months ago
• diskin-lab-chop / AutoGVP
  ☆24Updated 3 weeks ago
• pdxgx / neoepiscope
  predicts neoepitopes from phased somatic mutations detected using tumor/normal DNA-seq data
  ☆27Updated 2 years ago
• Edinburgh-Genome-Foundry / Geneblocks
  Find common blocks and differences between DNA sequences
  ☆42Updated 2 months ago
• MaayanLab / maayanlab-bioinformatics
  A collection of useful functions for bioinformatics data analysis
  ☆24Updated last month
• loosolab / UROPA
  Universal RObust Peak Annotator
  ☆16Updated 2 years ago