Alternatives and similar repositories for nf-tower

Users that are interested in nf-tower are comparing it to the libraries listed below

• stevekm / nextflow-demos
  Example Nextflow pipelines and programming techniques
  ☆106Updated last week
• nf-core / test-datasets
  Test data to be used for automated testing with the nf-core pipelines
  ☆139Updated this week
• ewels / AWS-iGenomes
  Documentation and description of AWS iGenomes S3 resource.
  ☆116Updated 9 months ago
• askimed / nf-test
  Simple test framework for Nextflow pipelines
  ☆169Updated this week
• igvteam / igv-webapp
  IGV Web App
  ☆124Updated last month
• openwdl / learn-wdl
  Educational materials for learning WDL
  ☆128Updated last year
• biowdl / tasks
  A collection of reusable WDL tasks. Category:Other
  ☆88Updated last month
• ga4gh / vrs-python
  GA4GH Variation Representation Python Implementation
  ☆59Updated 3 weeks ago
• nextflow-io / rnaseq-nf
  A proof of concept of RNAseq pipeline
  ☆79Updated 3 months ago
• CRG-CNAG / CalliNGS-NF
  GATK RNA-Seq Variant Calling in Nextflow
  ☆136Updated 2 years ago
• assemblerflow / flowcraft
  FlowCraft: a component-based pipeline composer for omics analysis using Nextflow.
  ☆245Updated last month
• KarchinLab / open-cravat
  A modular annotation tool for genomic variants
  ☆127Updated 2 weeks ago
• common-workflow-library / bio-cwl-tools
  CWL CommandLineTool descriptions for biology/life-sciences related applications
  ☆79Updated 5 months ago
• ga4gh / vrs
  Extensible specification for representing and uniquely identifying biological sequence variation
  ☆93Updated last month
• seqeralabs / nextflow-tutorial
  Nextflow training material for introductory tutorial
  ☆107Updated 3 years ago
• SciLifeLab / Sarek
  Detect germline or somatic variants from normal or tumour/normal whole-genome or targeted sequencing
  ☆133Updated 5 years ago
• BioContainers / multi-package-containers
  Testing building mulled containers for multi-requirement tools.
  ☆78Updated last week
• Illumina / Nirvana
  The nimble & robust variant annotator
  ☆185Updated last year
• bionitio-team / bionitio
  Demonstrating best practices for bioinformatics command line tools
  ☆116Updated 4 years ago
• broadinstitute / warp
  Warp Analysis Research Pipelines
  ☆215Updated this week
• snakemake / snakemake-wrappers
  This is the development home of the Snakemake wrapper repository, see
  ☆230Updated last week
• snakemake-workflows / docs
  Documentation of the Snakemake-Workflows project
  ☆154Updated 3 years ago
• nf-core / raredisease
  Call and score variants from WGS/WES of rare disease patients.
  ☆108Updated 3 weeks ago
• gatk-workflows / gatk4-germline-snps-indels
  Workflows for germline short variant discovery with GATK4
  ☆138Updated 4 years ago
• DecodeGenetics / graphtyper
  Population-scale genotyping using pangenome graphs
  ☆190Updated 8 months ago
• konradjk / loftee
  ☆180Updated 2 years ago
• nf-core / differentialabundance
  Differential abundance analysis for feature/ observation matrices from platforms such as RNA-seq
  ☆81Updated this week
• gatk-workflows / gatk4-data-processing
  Workflows for processing high-throughput sequencing data for variant discovery with GATK4 and related tools
  ☆156Updated 3 years ago
• ga4gh / benchmarking-tools
  Repository for the GA4GH Benchmarking Team work developing standardized benchmarking methods for germline small variant calls
  ☆204Updated 4 years ago
• nf-core / fetchngs
  Pipeline to fetch metadata and raw FastQ files from public databases
  ☆179Updated last month