bioconda / bioconda-utilsLinks
Utilities for building and managing bioconda recipes
☆103Updated this week
Alternatives and similar repositories for bioconda-utils
Users that are interested in bioconda-utils are comparing it to the libraries listed below
Sorting:
- Sequana: a set of Snakemake NGS pipelines☆146Updated last week
- Tools for manipulating biological data, particularly multiple sequence alignments☆157Updated last week
- Extension for Jupyter which integrates igv.js☆154Updated 2 years ago
- A collection of reusable WDL tasks. Category:Other☆87Updated last week
- Example Nextflow pipelines and programming techniques☆107Updated 2 months ago
- Simple FASTQ quality assessment using Python☆109Updated 4 years ago
- Plugins for the Ensembl Variant Effect Predictor (VEP)☆154Updated 3 weeks ago
- Testing building mulled containers for multi-requirement tools.☆76Updated this week
- Documentation and description of AWS iGenomes S3 resource.☆114Updated 8 months ago
- Demonstrating best practices for bioinformatics command line tools☆117Updated 4 years ago
- Galaxy RNA workbench☆40Updated 4 years ago
- Very simple, pure python, BAM file reader☆79Updated 6 years ago
- Long read production pipelines☆147Updated last week
- Galaxy Admin Training☆61Updated 8 months ago
- ☆62Updated 8 years ago
- Nextflow pipeline for analysis of direct RNA Nanopore reads☆106Updated last month
- Config files used to define parameters specific to compute environments at different Institutions☆103Updated last week
- HTSeq is a Python library to facilitate processing and analysis of data from high-throughput sequencing (HTS) experiments.☆125Updated 5 years ago
- An NGS read trimming tool that is specific, sensitive, and speedy. (production)☆122Updated 3 months ago
- Biopieces is a bioinformatic framework of tools easily used and easily created.☆142Updated 7 years ago
- AdapterRemoval v2 - rapid adapter trimming, identification, and read merging☆113Updated 2 months ago
- small RNA analysis from NGS data☆37Updated 11 months ago
- Tool for stripping adaptors and/or merging paired reads with overlap into single reads.☆144Updated 8 years ago
- python access to UCSC genomes database☆136Updated 4 years ago
- A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.☆97Updated 2 years ago
- List of tools included in https://usegalaxy.eu☆34Updated this week
- A fast Python and command-line utility for extracting simple statistics against genome positions based on sequence alignments from a SAM …☆194Updated last week
- NGS Language Bindings☆119Updated last year
- An efficient FASTQ manipulation suite☆138Updated 5 years ago
- VarSim: A high-fidelity simulation validation framework for high-throughput genome sequencing with cancer applications☆86Updated 10 months ago