bioconda / bioconda-utilsLinks
Utilities for building and managing bioconda recipes
☆103Updated last week
Alternatives and similar repositories for bioconda-utils
Users that are interested in bioconda-utils are comparing it to the libraries listed below
Sorting:
- Sequana: a set of Snakemake NGS pipelines☆151Updated this week
- Simple FASTQ quality assessment using Python☆109Updated 4 years ago
- Extension for Jupyter which integrates igv.js☆154Updated 3 years ago
- A collection of reusable WDL tasks. Category:Other☆88Updated last month
- Plugins for the Ensembl Variant Effect Predictor (VEP)☆163Updated this week
- Scripts, utilities and programs for genomic bioinformatics.☆83Updated 2 months ago
- Tools for manipulating biological data, particularly multiple sequence alignments☆159Updated last month
- Config files used to define parameters specific to compute environments at different Institutions☆107Updated last week
- Long read production pipelines☆151Updated last week
- Testing building mulled containers for multi-requirement tools.☆83Updated this week
- Example Nextflow pipelines and programming techniques☆106Updated 4 months ago
- Nextflow pipeline for analysis of direct RNA Nanopore reads☆110Updated 2 months ago
- Documentation and description of AWS iGenomes S3 resource.☆120Updated last year
- Demonstrating best practices for bioinformatics command line tools☆117Updated 5 years ago
- ☆63Updated 9 years ago
- AdapterRemoval v2 - rapid adapter trimming, identification, and read merging☆113Updated this week
- HTSeq is a Python library to facilitate processing and analysis of data from high-throughput sequencing (HTS) experiments.☆128Updated 5 years ago
- An NGS read trimming tool that is specific, sensitive, and speedy. (production)☆126Updated 8 months ago
- Platypus Variant Caller☆108Updated last year
- Fast HLA type inference from whole-genome data☆141Updated 9 months ago
- A fast Python and command-line utility for extracting simple statistics against genome positions based on sequence alignments from a SAM …☆195Updated 2 weeks ago
- Open workflow definitions for genomic analysis from MGI at WUSM.☆104Updated 6 months ago
- IGV Web App☆126Updated this week
- Scalable gVCF merging and joint variant calling for population sequencing projects☆175Updated last year
- A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.☆98Updated 2 years ago
- small RNA analysis from NGS data☆37Updated last year
- Galaxy RNA workbench☆41Updated 5 years ago
- An imagemagick-like frontend to Biopython SeqIO☆117Updated last year
- VarSim: A high-fidelity simulation validation framework for high-throughput genome sequencing with cancer applications☆90Updated last year
- Test data to be used for automated testing with the nf-core pipelines☆150Updated this week