☆64Sep 21, 2016Updated 10 years ago
Alternatives and similar repositories for Community_Software_Tools_for_NGS
Users that are interested in Community_Software_Tools_for_NGS are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Big Browser watching your genome☆11Apr 10, 2016Updated 10 years ago
- PathOS is a clinical application for filtering, analysing and reporting on NGS variants☆29Mar 30, 2021Updated 5 years ago
- The Exome Coverage and Identification Report displays the coverage of every target region in your capture design. It also displays regio…☆14Apr 22, 2015Updated 11 years ago
- Clin.iobio - Workflow and reporting for iobio variant analysis pipeline☆12Oct 7, 2025Updated last year
- Plot allele frequencies in VCF files☆11Apr 13, 2026Updated 6 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- A fast, easy way to present complex bioinformatics pipelines to biologists☆12Sep 28, 2018Updated 8 years ago
- This repo provides tools to convert ClinVar data into a tab-delimited flat file, and also provides that resulting tab-delimited flat file…☆130Feb 13, 2020Updated 6 years ago
- Pipeline in place at the UGI for DNA level analysis☆12Aug 29, 2016Updated 10 years ago
- Metagenomics Pipeline Repository for January, 2015 NCBI/ADDS Hackathon at NIH☆10Oct 31, 2016Updated 10 years ago
- Resources that facilitate and automate the analysis of RNA-Seq data☆12Aug 30, 2019Updated 7 years ago
- Gene expression viewer template☆12Aug 30, 2017Updated 9 years ago
- utilities for working with IGV: opening files remotely in either desktop IGV or a web viewer (igv.js), creating screenshots, etc.☆48May 7, 2019Updated 7 years ago
- Automated human exome/genome variants detection from FASTQ files☆23Sep 27, 2021Updated 5 years ago
- Allele frequency filtering for Mendelian variant discovery☆18Sep 27, 2016Updated 10 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- myVCF: a web-based platform for target and exome mutations data management☆21Apr 13, 2021Updated 5 years ago
- CNV calling algorithm for detection of homozygous and hemizygous deletions from whole exome sequencing data☆12Nov 9, 2025Updated 11 months ago
- Visualizing genetic sequence variation☆14Apr 27, 2020Updated 6 years ago
- ☆11Feb 16, 2021Updated 5 years ago
- annotate a VCF with other VCFs/BEDs/tabixed files☆404Jun 16, 2026Updated 4 months ago
- Visualisation and prioritisation of genomic variants from human exome sequencing projects☆13Apr 23, 2019Updated 7 years ago
- Workflows used for WGS data processing -- replaced by https://github.com/gatk-workflows/gatk4-genome-processing-pipeline☆57Jan 24, 2020Updated 6 years ago
- A pipeline for whole genome assembly☆18Apr 21, 2022Updated 4 years ago
- Structural Variant Prediction Viewer☆36Jul 19, 2017Updated 9 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- filtering trio-based genetic variants in VCFs for clinical review☆22Aug 18, 2020Updated 6 years ago
- A Template for Clear and Simple Documentation of Bioinformatics Code☆16Jan 24, 2018Updated 8 years ago
- ☆18Mar 11, 2018Updated 8 years ago
- Examples of kallisto + sleuth☆11May 18, 2017Updated 9 years ago
- Automated ACMG/AMP classification for human variants associated with congenital hearing loss☆11May 14, 2025Updated last year
- GenomicsDB☆109Jan 3, 2023Updated 3 years ago
- ☆28Oct 5, 2018Updated 8 years ago
- VariantGrid public repo☆31Updated this week
- ☆10May 17, 2021Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- dv-trio provides a pipeline to call variants for a trio (father-mother-child) using DeepVariants [1]. Genomic Variant Calling Files (gVCF…☆11Feb 3, 2021Updated 5 years ago
- HPC based pipelines for variant calling using GATK☆17Apr 6, 2020Updated 6 years ago
- Boiler: a software tool for highly efficient, lossy compression of RNA-seq alignments☆13Jul 14, 2016Updated 10 years ago
- RTG Core: Software for alignment and analysis of next-gen sequencing data.☆53May 27, 2025Updated last year
- Indigo: SNV and InDel Discovery in Chromatogram traces obtained from Sanger sequencing of PCR products☆37Oct 19, 2026Updated 2 weeks ago
- Build and deploy Singularity containers to GitHub releases, and pull with the singularity-hpc client☆17Oct 12, 2023Updated 3 years ago
- Classifies genes as an oncogene, tumor suppressor gene, or as a non-driver gene by using Random Forests☆50Sep 2, 2026Updated 2 months ago