LANL-Bioinformatics / EDGELinks
EDGE is a highly adaptable bioinformatics platform that allows laboratories to quickly analyze and interpret genomic sequence data.
☆75Updated last month
Alternatives and similar repositories for EDGE
Users that are interested in EDGE are comparing it to the libraries listed below
Sorting:
- A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.☆97Updated 2 years ago
- Tools for next-generation sequencing analysis☆88Updated 6 years ago
- YAMP: Yet Another Metagenomic Pipeline☆60Updated 2 years ago
- just annotate it, dammit!☆93Updated last year
- De novo assembly based variant calling pipeline for Illumina short reads☆108Updated 4 years ago
- SURPI☆84Updated 9 years ago
- The Biological Observation Matrix (BIOM) Format Project☆94Updated 3 weeks ago
- List of computational resources for analyzing microbial sequencing data.☆68Updated last month
- PrimerTree: Visually Assessing the Specificity and Informativeness of Primer Pairs☆52Updated last year
- An integrated pipeline for estimating strain-level genomic variation from metagenomic data☆128Updated last year
- De novo transcriptome assembler for short reads☆63Updated 7 years ago
- NextSeq specific bcl2fastq2 wrapper.☆55Updated 4 years ago
- A 3'-end adapter contaminant trimmer☆95Updated 7 years ago
- Dockerised Next Generation Sequencing Pipeline (QC, Align, Calling, Annotation)☆87Updated 8 years ago
- Sample search by metadata and features☆47Updated last year
- de novo virus assembler of Illumina paired reads☆56Updated 4 years ago
- Maximum likelihood demultiplexing☆47Updated 5 months ago
- viral-ngs: complete pipelines☆65Updated last week
- Scripts, utilities and programs for genomic bioinformatics.☆83Updated last month
- High-performance error correction for Illumina resequencing data☆72Updated 9 years ago
- Experimental pipeline for correcting nanopore reads☆39Updated 8 years ago
- UCSC Nanopore group's software pipeline for reference-based sequence analysis☆54Updated 9 years ago
- ☆107Updated last month
- Antibiotic resistance predictions in minutes on a laptop☆50Updated 6 years ago
- Metagenomic profiling and phylogenetic distances via common kmers☆42Updated 4 years ago
- Blast2Bam uses the XML results of Blastn, the reference and the fastQ or fasta file(s) to output a SAM file.☆48Updated 4 years ago
- De novo genome assembly and multisample variant calling☆112Updated 6 years ago
- An NGS read trimming tool that is specific, sensitive, and speedy. (production)☆122Updated 3 months ago
- Interactive, web-based BLAST results visualization tool. Accessible at https://kablammo.wasmuthlab.org.☆68Updated 2 years ago
- NGS Language Bindings☆119Updated last year