☆36Apr 17, 2025Updated last year
Alternatives and similar repositories for magicblast
Users that are interested in magicblast are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- This repository contains the source code of the R package for EvoGeneX, a software to infer the mode of evolution from the gene expressio…☆29Dec 1, 2025Updated 5 months ago
- Scaffolding of genomic assemblies with RNA seq data☆15Oct 8, 2015Updated 10 years ago
- Smith-Waterman database searches with inter-sequence SIMD parallelisation☆61Nov 7, 2023Updated 2 years ago
- fastq quality assessment and filtering tool☆18Dec 10, 2022Updated 3 years ago
- Assembler for raw de novo genome assembly of long uncorrected reads.☆35Dec 11, 2019Updated 6 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Scaffolding with RNA-seq read alignment☆21Jul 10, 2018Updated 7 years ago
- Useful functions for manipulating Multiplex Assay of Variant Effect datasets.☆10Feb 6, 2025Updated last year
- Fast-SG: An alignment-free algorithm for ultrafast scaffolding graph construction from short or long reads.☆22May 29, 2018Updated 7 years ago
- ViromeScan allows the user to explore and taxonomically characterize the virome from metagenomic reads, efficiently denoising samples fro…☆13Feb 13, 2023Updated 3 years ago
- TreeGrafter is a new software tool for annotating uncharacterized protein sequences, using annotated phylogenetic trees.☆13Apr 13, 2026Updated 2 weeks ago
- hs-blastn, a fast and accurate nucleotide-nucleotide sequences aligner.☆27Aug 12, 2020Updated 5 years ago
- bíogo ncbi utilities repository☆21Jun 27, 2021Updated 4 years ago
- CLI to automate Nextflow pipeline testing☆12Dec 15, 2025Updated 4 months ago
- Iterative error correction of long reads☆13Dec 9, 2022Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆12Sep 11, 2025Updated 7 months ago
- 10x Genomics Reads Simulator☆46Dec 26, 2023Updated 2 years ago
- ☆316Jan 15, 2026Updated 3 months ago
- Alignment algorithm for short Illumina reads to a de Bruijn graph☆17Jun 4, 2019Updated 6 years ago
- Software for aligning viewing and editing dna/aminoacid sequences, intuitive, fast and lightweight. Download and website:☆155Mar 10, 2026Updated last month
- Conditional Reciprocal Best Blast☆43Mar 22, 2017Updated 9 years ago
- Integrated toolkit for analysis and evaluation of annotated genomes☆25Aug 1, 2025Updated 9 months ago
- Dockerfiles to build Biopython instances☆28Aug 30, 2016Updated 9 years ago
- ☆49Dec 29, 2022Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Freelance bioinformaticians directory☆10Feb 10, 2023Updated 3 years ago
- BAMscale is a one-step tool for either 1) quantifying and normalizing the coverage of peaks or 2) generated scaled BigWig files for easy …☆74Dec 4, 2024Updated last year
- Incremental building of phylogenetic distance trees☆31Updated this week
- Software for Ontogenic aNalysis of Antibody Repertoires☆19Sep 25, 2025Updated 7 months ago
- d'accord is a non hybrid long read consensus program based on local de Bruijn graph assembly☆19Sep 12, 2018Updated 7 years ago
- Variant call adjudication☆17Jun 13, 2024Updated last year
- Layout module for raw de novo genome assembly of long uncorrected reads.☆21Feb 2, 2021Updated 5 years ago
- Nextflow workflow for automatic repeat detection, classification and masking☆13Feb 19, 2018Updated 8 years ago
- ☆15Apr 19, 2018Updated 8 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆18Apr 10, 2015Updated 11 years ago
- A (very) fast program for getting statistics about a fastq file, the way I need them, written in Rust☆32Mar 20, 2026Updated last month
- Ococo: the first online variant and consensus caller. Call genomic consensus directly from an unsorted SAM/BAM stream.☆46Jan 18, 2019Updated 7 years ago
- The Zika bioinformatics pipeline☆37Mar 29, 2020Updated 6 years ago
- ☆30Jul 10, 2019Updated 6 years ago
- Pacbio sequence alignment tool, please use "git clone" to copy and use the repository☆18Feb 17, 2019Updated 7 years ago
- small RNA analysis from NGS data☆39Sep 6, 2024Updated last year