Docker for Bioinformatics
☆20Aug 20, 2026Updated 3 weeks ago
Alternatives and similar repositories for registry
Users that are interested in registry are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- An extension of the ProteoWizard framework enabling the support of the mzDB format☆14Feb 12, 2021Updated 5 years ago
- An online database of variants functionally demonstrated to affect (or not affect) splicing.☆13Jul 7, 2026Updated 2 months ago
- some generic (but hopefully still useful) recommendations on writing your thesis☆11Mar 24, 2023Updated 3 years ago
- Single-cell Analysis of Host-Microbiome Interactions☆11Jul 17, 2025Updated last year
- Dockerised Next Generation Sequencing Pipeline (QC, Align, Calling, Annotation)☆86Jul 10, 2017Updated 9 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Notes for a workshop on using git and github☆10Dec 13, 2019Updated 6 years ago
- ☆10Dec 12, 2017Updated 8 years ago
- This is the BWA workflow used in the PanCancer project used to allign all the BAM files.☆11Dec 27, 2022Updated 3 years ago
- Open-source java library to handle different file format standards for proteomics. Specially ms-data-core-api is good for MetaData repres…☆11Oct 23, 2019Updated 6 years ago
- An easy-to-use way for running Galaxy workflows.☆20Nov 19, 2019Updated 6 years ago
- Cluster up to millions of peptide sequences on shared sequence motifs.☆13Oct 1, 2018Updated 7 years ago
- Snakemake skeleton - Build workflows with Snakemake☆19May 17, 2024Updated 2 years ago
- IPython running in a docker container. This image can be used to integrate IPython into Galaxy☆17Mar 15, 2016Updated 10 years ago
- Accessing AlphaMissense Data Resources in R☆13Sep 7, 2026Updated last week
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- BioContainers specifications☆53Mar 1, 2023Updated 3 years ago
- Symmetric matrix as a list of the values in its upper or lower triangular part. Useful for representing pairwise measures or comparisons …☆20Sep 14, 2023Updated 3 years ago
- Example chats from running BioMCP for demonstrations☆17Jun 20, 2025Updated last year
- 🦄 tmTheme and rstheme based on the `fairlyfloss` theme☆11Jan 7, 2020Updated 6 years ago
- ☆13Apr 2, 2025Updated last year
- Bioinformatics containers☆814Jul 7, 2026Updated 2 months ago
- a tale of two applications. one built as a monolith. the same built with microservices☆15Jul 30, 2015Updated 11 years ago
- ☆18Sep 6, 2022Updated 4 years ago
- An open source genomics data analysis package based on deep learning for auto tuning network structure and building models.☆21Oct 3, 2023Updated 2 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- NSU bioinformatics Python course☆14Sep 24, 2024Updated last year
- Lesson for the shell for genomics☆11Jan 12, 2021Updated 5 years ago
- Recommendations to contenarized your bioinformatics software☆12May 30, 2018Updated 8 years ago
- Print the Output of Intermediate Steps of a Call☆23Feb 5, 2021Updated 5 years ago
- Python HyPhy: Facilitating HyPhy execution and parsing☆21Dec 7, 2021Updated 4 years ago
- A collection of well-known bioinformatics programs.☆25Apr 24, 2015Updated 11 years ago
- Map4RDF allows visualising and interacting with Linked Geospatial Data available in any SPARQL endpoint☆10Feb 9, 2020Updated 6 years ago
- ☆37Updated this week
- MS File ToolBox - tools for parsing some mass-spectrometry related file formats (mzML, mzXML, pep.xml, prot.xml, etc.)☆13Aug 26, 2022Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- DRAGEN Tumor/Normal workflow post-processing☆24Sep 18, 2023Updated 3 years ago
- Bpipe - a tool for running and managing bioinformatics pipelines☆241Sep 5, 2026Updated 2 weeks ago
- Mapping script which transforms GTFS CSV into GTFS RDF (turtle, jsonld or ntriples)☆14Sep 25, 2018Updated 7 years ago
- Bring Your Own Bioinformatics☆27Apr 28, 2016Updated 10 years ago
- Execute pipelines and other workflows of docker containers.☆11Oct 1, 2016Updated 9 years ago
- PopLeopardCat☆12Aug 23, 2021Updated 5 years ago
- pDeepXL: MS/MS spectrum prediction for cross-linked peptide pairs by deep learning☆13Feb 8, 2021Updated 5 years ago