BioContainers / mulled
Mulled - Automatized Containerized Software Repository
☆66Updated last year
Alternatives and similar repositories for mulled:
Users that are interested in mulled are comparing it to the libraries listed below
- conda recipes for genomic data☆85Updated 3 years ago
- [Historical] Reproducible Analyses for Bioinformatics☆106Updated 6 years ago
- Handy command line utility for Galaxy administrators☆23Updated last month
- Docker images of bioinformatics software☆21Updated 7 years ago
- Command-line utilities to assist in developing Galaxy and Common Workflow Language artifacts - including tools, workflows, and training m…☆92Updated last week
- ☆11Updated 8 years ago
- A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.☆97Updated 2 years ago
- CRAM format specification and java API for read data.☆59Updated 6 years ago
- Testing building mulled containers for multi-requirement tools.☆71Updated this week
- transparently build CWL and Galaxy XML tool definitions for any script that uses argparse☆27Updated 5 months ago
- [Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows☆43Updated last year
- a wee tool for random access into BGZF files.☆84Updated 6 years ago
- Library of snakemake rules.☆12Updated 6 years ago
- a simple read-only sequence database, designed for short reads☆66Updated last year
- Galaxy tools and workflows developed at the Earlham Institute☆14Updated 2 weeks ago
- Galaxy Admin Training☆61Updated 4 months ago
- Generating tool descriptors from bio.tools☆9Updated 6 years ago
- Snakemake library for bioinformatics programs, with a focus on next-generation sequencing☆22Updated 9 years ago
- This repository has been archived, currently maintained version is at https://github.com/iii-companion/companion☆21Updated 4 years ago
- VarSim: A high-fidelity simulation validation framework for high-throughput genome sequencing with cancer applications☆83Updated 6 months ago
- Request for comments on interchangeable bioinformatics containers☆40Updated 5 years ago
- Import a CWL workflow specification to Nextflow script (experimental)☆27Updated 6 years ago
- cache packages permanently☆14Updated 9 months ago
- List of tools included in https://usegalaxy.eu☆26Updated this week
- A fast Python library for VCF files leveraging Cython for speed.☆52Updated 7 years ago
- EDGE is a highly adaptable bioinformatics platform that allows laboratories to quickly analyze and interpret genomic sequence data.☆73Updated last month
- Run bcbio-nextgen genomic sequencing analyses using isolated containers and virtual machines☆65Updated 4 years ago
- WDL and CWL compiler for the DNAnexus platform☆33Updated last week
- ☆83Updated last month
- Genomics Research Container Architecture☆48Updated 5 years ago