evelinag / clusternomics
Integrative clustering for heterogeneous biomedical datasets.
☆14Updated 4 years ago
Alternatives and similar repositories for clusternomics:
Users that are interested in clusternomics are comparing it to the libraries listed below
- R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/☆41Updated 2 months ago
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆44Updated 3 months ago
- countsimQC - Compare characteristic features of count data sets☆27Updated 2 months ago
- A R package for Grade of Membership model and Visualization of counts data:☆31Updated 4 years ago
- Smooth quantile normalization (qsmooth) is a generalization of quantile normalization, which is an average of the two types of assumption…☆50Updated 2 years ago
- Single Cell multimodal data scripts for downloading datasets☆17Updated 3 months ago
- [DEPRECATED] Docker Images which include a complete installation of all software needed to build all Bioconductor packages☆25Updated last year
- R interface to morpheus.js heatmap widget☆38Updated 4 years ago
- My notes/usage examples for various Bioconductor packages☆15Updated 8 years ago
- R package to model time series accounting for noise in the temporal dimension. Specifically designed for single cell transcriptome experi…☆15Updated 3 years ago
- Bioconductor package for management of multi-assay data☆71Updated 3 weeks ago
- R package for benchmarking single cell analysis methods☆30Updated last year
- Bioconductor2017 workshop - Analysis of single-cell RNA-seq data: Normalization, dimensionality reduction, clustering, and lineage infere…☆11Updated 7 years ago
- Independent Hypothesis Weighting☆15Updated last year
- Tidy up computational biology objects☆49Updated 6 years ago
- R package for detecting differential distributions using a statistical test based on the wasserstein distance☆25Updated last year
- Interactive benchmarking of ranking and assignment methods☆14Updated 2 months ago
- Various Ideas for Confounder Adjustment in Regression☆23Updated last year
- A Grammar of Data Manipulation for Omics Data☆21Updated 4 years ago
- This python package is for transitioning bioconductor from SVN to git☆14Updated last year
- Glimma R package☆50Updated 6 months ago
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Updated 5 years ago
- Code for the Recount project☆11Updated 2 months ago
- Compilation of R heatmap functions.☆14Updated 3 years ago
- Repository for signature genes from Immune Cell Atlas☆18Updated 5 years ago
- ☆15Updated 4 years ago
- Bayesian Hierarchical Modeling for Clustering Single Cell Genomic Data☆48Updated 5 years ago
- Explore design matrices interactively with R/Shiny☆37Updated 2 months ago
- ☆94Updated 10 months ago
- Modeling and correcting fragment sequence bias for RNA-seq☆24Updated 8 months ago