NExt generation Analysis Toolbox
☆14Oct 18, 2015Updated 10 years ago
Alternatives and similar repositories for NEAT
Users that are interested in NEAT are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Toolbox for generic NGS analyses - A framework to quickly build pipelines and to perform large-scale NGS analysis☆18Nov 2, 2022Updated 3 years ago
- Automated CWL and Galaxy XML generation for Python tools that use argparse and click☆11Jul 29, 2019Updated 6 years ago
- Proof of concept to use ansible + Lmod to deploy a bioinformatics server☆25Jun 5, 2025Updated 10 months ago
- GARFIELD-NGS: Genomic vARiants FIltering by dEep Learning moDels in NGS☆17Mar 4, 2019Updated 7 years ago
- Run bcbio-nextgen genomic sequencing analyses using isolated containers and virtual machines☆68Jun 3, 2020Updated 5 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- R/Shiny application for viewing microbial community data☆19Dec 17, 2020Updated 5 years ago
- ☆10Aug 28, 2025Updated 7 months ago
- Visualise interstrain recombination from environmental samples.☆27Apr 18, 2019Updated 6 years ago
- Hover.css Animations for 'shiny' Buttons☆15Mar 19, 2021Updated 5 years ago
- Artisanal 🤣 bioinformatics tools and pipelines in Scala☆20Jan 28, 2020Updated 6 years ago
- HGNC Comparison of Orthology Predictions (HCOP)☆15Mar 22, 2018Updated 8 years ago
- NGS course☆34Mar 21, 2017Updated 9 years ago
- React widgets for Shiny apps☆19Mar 18, 2019Updated 7 years ago
- Rails application for storing and parsing clinical exome VCF files. Gene annotations can be retrieved via Biomart integration from Ensemb…☆10May 7, 2017Updated 8 years ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Out-of-Core Principal Component Analysis☆19Dec 25, 2017Updated 8 years ago
- Perception and labelling of stereogenic centres in chemical structures☆20Jan 30, 2024Updated 2 years ago
- Software for creating and comparing genome fingerprints.☆11Jun 30, 2024Updated last year
- Generate HTML report for a set of genomic regions or DESeq2/edgeR results☆10Mar 31, 2026Updated 2 weeks ago
- ☆14Jul 7, 2023Updated 2 years ago
- Slides from my talk "Don’t reinvent the wheel: making use of shiny extension packages"☆22Feb 23, 2019Updated 7 years ago
- Scaffolding with RNA-seq read alignment☆21Jul 10, 2018Updated 7 years ago
- A data analysis web-app written in R Shiny.☆22May 6, 2019Updated 6 years ago
- ☆10Jun 21, 2015Updated 10 years ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- The {connectwidgets} package allows you to curate your content on RStudio Connect, helping to create organized groups of content within a…☆22May 6, 2025Updated 11 months ago
- An open-source high-performance web-based HTML5 genome browser. Genome Maps can be customized and allow browsing user data such as BAM an…☆38Sep 27, 2018Updated 7 years ago
- Running RStudio inside ShinyProxy☆16Jul 3, 2025Updated 9 months ago
- an extension of the rocker/verse Docker image to include additional apps, drivers; secured by ShinyProxy.☆26Sep 8, 2021Updated 4 years ago
- Machine learning use cases for teaching☆13Jul 12, 2017Updated 8 years ago
- Non-negative Independent Factor Analysis for single cell RNA-seq☆11Feb 25, 2022Updated 4 years ago
- Validation runs using bcbio: germline, somatic, structural variant calling and RNA-seq analyses☆31Feb 12, 2022Updated 4 years ago
- Code for KekuleScope☆11Nov 22, 2022Updated 3 years ago
- Variant Effect Prediction for Python☆16Apr 5, 2017Updated 9 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Request for comments on interchangeable bioinformatics containers☆39Jun 18, 2019Updated 6 years ago
- Archive of original RNAseq.wiki tutorial that accompanied PLoS Comp Bio paper☆13Nov 13, 2016Updated 9 years ago
- Argument Mining Python implementation☆13Jul 28, 2023Updated 2 years ago
- vov.css animations for shiny☆23Sep 1, 2020Updated 5 years ago
- Refactored libsvm for easily plugging custom kernels (e.g., Tree Kernel) written in Java.☆23Oct 18, 2013Updated 12 years ago
- A Template for Clear and Simple Documentation of Bioinformatics Code☆16Jan 24, 2018Updated 8 years ago
- [Historical] Reproducible Analyses for Bioinformatics☆106Mar 11, 2019Updated 7 years ago