galaxyproject / cargo-port
cache packages permanently
☆14Updated 10 months ago
Alternatives and similar repositories for cargo-port:
Users that are interested in cargo-port are comparing it to the libraries listed below
- Precursor to SnakeChunks, see https://github.com/SnakeChunks/SnakeChunks. This project has moved and will no longer be edited here.☆11Updated 7 years ago
- Manuscript describing ChronQC is now available online in Bioinformatics☆18Updated 5 years ago
- Simon's Data Club - Reference data for Galaxy servers☆10Updated last year
- Awesome resources related to Galaxy project☆12Updated 5 months ago
- ☆13Updated 7 years ago
- The command-line interface to GGD☆42Updated 2 years ago
- Docker images of bioinformatics software☆21Updated 7 years ago
- Galaxy Github repository BETA 1. May be destroyed and recreated if post-conversion problems are found (but post-conversion commits on thi…☆12Updated 10 years ago
- Import a CWL workflow specification to Nextflow script (experimental)☆27Updated 6 years ago
- GitHub Action to launch a workflow using Nextflow Tower.☆12Updated 2 years ago
- A Teaching Engine for Genomics☆12Updated 4 years ago
- ☆19Updated 8 years ago
- Nextflow workshop 2018 -- Training pages -> https://nextflow-io.github.io/nf-hack18/☆18Updated 6 years ago
- Homebrew formulae for bioinformatics software only available for Linux☆27Updated 5 years ago
- Import and run CWL workflows on DNAnexus (alpha)☆13Updated 6 years ago
- Docker containers for bioinformatics with a small footprint☆23Updated last year
- Making Snakemake workflows into full-fledged command line tools since 1999.☆51Updated 7 years ago
- Visualise interstrain recombination from environmental samples.☆26Updated 6 years ago
- This repository has been archived, currently maintained version is at https://github.com/iii-companion/companion☆21Updated 4 years ago
- Simplify snpEff annotations for interesting cases☆22Updated 6 years ago
- A collection of publications on comparison of high-throughput sequencing technologies.☆27Updated 4 months ago
- Reads the output from CLI help commands, and generates machine readable schemas (CWL etc)☆14Updated 4 years ago
- prioritize effects of variant annotations from VEP, SnpEff, et al.☆34Updated 4 months ago
- BigWig manpulation tools using libBigWig and htslib☆29Updated 8 months ago
- reference free variant assembly☆33Updated last year
- Chanjo provides a better way to analyze coverage data in clinical sequencing.☆50Updated 4 months ago
- conda recipes for genomic data☆85Updated 3 years ago
- Automated next generation DNA sequencing analysis pipeline suited for clinical tests, with >99.9% sensitivity to Sanger sequencing at rea…☆26Updated 5 years ago
- Converts Prokka GFF3 files to EMBL files for uploading annotated assemblies to EBI☆29Updated 6 years ago
- Analysis Framework for Biological Data from High Throughput Experiments☆34Updated 8 years ago