Stand-alone, lightweight, and fast JavaScript browser for EDAM and other ontologies
☆15May 9, 2025Updated 10 months ago
Alternatives and similar repositories for edam-browser
Users that are interested in edam-browser are comparing it to the libraries listed below
Sorting:
- EDAM is an ontology of data analysis and data management in bio- and other sciences, and science-based applications. It comprises concept…☆136Feb 26, 2026Updated last week
- An analysis pipeline for long-reads from both PacBio and Oxford Nanopore Technologies (ONT), written in Nextflow.☆55Updated this week
- biotoolsSchema : Tool description data model for computational tools in life sciences☆39Dec 13, 2025Updated 2 months ago
- various tools to download, convert and process the full text of scientific articles☆10Apr 2, 2024Updated last year
- Pynocular is a lightweight ORM that lets you query your database using Pydantic models and asyncio☆12May 24, 2022Updated 3 years ago
- ☆10Aug 28, 2025Updated 6 months ago
- Shortcuts to make git pull requests take less keystrokes☆12Dec 8, 2023Updated 2 years ago
- Tool to upload SARS-CoV-2 sequences to BH20 Arvados instance and orchestrate analysis☆13Sep 21, 2022Updated 3 years ago
- Phylogenetic Placement Evaluation Workflows : Benchmark placement software and different reference trees☆12Jan 31, 2025Updated last year
- Registration of Galaxy Tools in Elixir☆12Jan 7, 2019Updated 7 years ago
- Network representation learning on drug-target-side effects-indication graphs for side effect prediction☆13Feb 4, 2020Updated 6 years ago
- A Perl pipeline for identifying marker genes and build phylogenetic trees for a set of genomes☆14Jun 19, 2017Updated 8 years ago
- Sequence Bloom Trees with All/Some split☆11Oct 30, 2018Updated 7 years ago
- ☆13Mar 12, 2020Updated 5 years ago
- Pipeline for eukaryotic genome annotation based on external evidences☆14Feb 23, 2023Updated 3 years ago
- A fast tool to convert BioJS components into Galaxy visualization plugins.☆14Jul 15, 2020Updated 5 years ago
- Wrapper for generating PROV provenance information for commands and python scripts☆15Oct 14, 2014Updated 11 years ago
- Population Genomics in R workshop☆12Mar 24, 2024Updated last year
- ☆13Aug 30, 2024Updated last year
- Build components for CloudMan, Galaxy on the Cloud, or Galaxy Server☆20Jun 27, 2017Updated 8 years ago
- ☆11Nov 22, 2024Updated last year
- Managing Open and Reproducible Computational Projects☆12Jan 21, 2025Updated last year
- Variant to disease dataset workflows for Open Targets Genetics☆13Aug 23, 2022Updated 3 years ago
- Browser-based tool for visualizing and analyzing germline copy number variants in genomic data☆10Nov 7, 2024Updated last year
- A wrapper of the 'React-Toastify' library, for usage in Shiny.☆12Jul 31, 2021Updated 4 years ago
- Robust and ready-to-use tasks and workflows for a variety of bioinformatics pipelines. Use Flyte and Union to orchestrate anything from v…☆12Apr 2, 2025Updated 11 months ago
- The data API server for outbreak.info☆11Jan 27, 2025Updated last year
- A metadata commons to store research software metadata☆46Updated this week
- Misc. documents for the Bioinformatics Open Source Conference (BOSC), https://www.open-bio.org/events/bosc/☆13Updated this week
- scpca-nf is the Nextflow workflow for processing Single-cell Pediatric Cancer Atlas Portal data☆13Updated this week
- ☆12Jun 7, 2024Updated last year
- Curated list of resources for variant prioritization☆14Nov 18, 2025Updated 3 months ago
- Automated testing - Preventing yourself and others from breaking your functioning code☆12Mar 2, 2026Updated last week
- Documentation for PEP specification and all PEPkit software☆10Updated this week
- An extensible Ruby on Rails web-service application and database for visualising HTGS data☆18Mar 7, 2014Updated 12 years ago
- Python tool to run docker containers in sequence, for reproducible computational analysis pipelines☆11Oct 23, 2015Updated 10 years ago
- GBIF machine-readable resources☆15Feb 16, 2026Updated 3 weeks ago
- A list of awesome bioinformatics communities☆21Oct 3, 2024Updated last year
- An assembly workflow for analysing data in the Earth Biogenome Project pilot project.☆15Updated this week