hinderling / napari_pixel_classifierLinks
An Ilastik-like interactive pixel classifier.
☆16Updated 11 months ago
Alternatives and similar repositories for napari_pixel_classifier
Users that are interested in napari_pixel_classifier are comparing it to the libraries listed below
Sorting:
- ☆31Updated last year
- A module with convenience functions for writing Python code that interacts with OMERO.☆45Updated this week
- Visualizing feature measurements on label images in napari☆10Updated last year
- Track and lineage visualization with btrack and Napari☆45Updated 9 months ago
- Lectures for a napari training course☆50Updated last year
- Training resources for Students at Uni Leipzig who want to dive into bio-image data science with Python. The material will develop betwee…☆38Updated last year
- GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.☆43Updated 3 months ago
- Guides and code for 3D nuclear instance segmentation☆22Updated last month
- A napari plugin for clustering objects according to their properties.☆87Updated last week
- StarDist plugin for napari☆40Updated 11 months ago
- Python package for writing 5D numpy arrays to HDF5 files readable by both Imaris and BigDataViewer☆12Updated 3 years ago
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆18Updated 3 months ago
- Image registration (alignment) software for large microscopy images☆25Updated last year
- A collection of Image Processing and Analysis (IPA) functions used at the Facility for Advanced Imaging and Microscopy (FAIM)☆17Updated last week
- A stable diffusion demo for napari☆11Updated last year
- Napari Visualization tool for Trackmate > 6.0 XML files for 2/3D + time tracks. Available via pip package napatrackmater.☆17Updated 2 weeks ago
- Command-line client for Fractal☆46Updated last week
- A writer and reader for NGFF OME-Zarr datasets☆14Updated 3 years ago
- Multiple file format reading directly into napari using pure Python☆37Updated last year
- A minimal dependency napari plugin giving access to scikit-image functions☆18Updated last month
- A napari plugin for zarr backed OME-NGFF images☆33Updated this week
- ☆22Updated last year
- Resources for teaching/preparing to teach bioimage analysis☆58Updated 3 weeks ago
- Python libraries for loading, running and packaging bioimage.io models☆33Updated 2 weeks ago
- Running compute-intense parts of BigStitcher distributed☆26Updated 2 weeks ago
- ☆24Updated 2 years ago
- A 3D interactivity toolbox for napari☆37Updated last month
- ☆36Updated last week
- ☆37Updated this week
- Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets☆26Updated 5 months ago