Solve bio-image analysis puzzles!
☆13Apr 26, 2025Updated last year
Alternatives and similar repositories for bia-bubbles
Users that are interested in bia-bubbles are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆15Updated this week
- A minimal dependency napari plugin giving access to scikit-image functions☆25Oct 5, 2026Updated 3 weeks ago
- Maven project to easily connect to OMERO.☆11Oct 1, 2026Updated 3 weeks ago
- An OMERO.web app for sharing data and prepare data for web download.☆12Sep 18, 2026Updated last month
- Scientific Dataset Quality Control and Data Exploration Tool☆29Updated this week
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- SciCount is tool focused on counting and classifying of objects in image-like data and scientific images, with training and example datas…☆11Oct 24, 2023Updated 3 years ago
- OMERO plugin for metadata manipulation https://www.openmicroscopy.org/omero/☆10Aug 10, 2026Updated 2 months ago
- NGFF-Converter is a GUI application for conversion of bioimage formats into OME-NGFF (Next-Generation File Format) or OME-TIFF☆40Oct 1, 2026Updated 3 weeks ago
- A module with convenience functions for writing Python code that interacts with OMERO.☆47Dec 4, 2025Updated 10 months ago
- Automated batch processing of tissue microscopy image data with a text-based interface☆10Mar 24, 2026Updated 7 months ago
- A simple automated feedback microscopy tool for live tracking of moving samples.☆15May 28, 2026Updated 5 months ago
- Z-stack Depth Colorcode ImageJ FIJI plugin☆25Nov 6, 2025Updated 11 months ago
- A list of awesome bioimage analysis challenges☆10Feb 1, 2022Updated 4 years ago
- A Board Game to teach co-localization analysis☆16Nov 1, 2024Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- An OpenSeadragon tile source for the OME-Zarr bioimage file format☆13Sep 26, 2026Updated last month
- A template repo used to make new napari plugins☆42Oct 14, 2026Updated 2 weeks ago
- Linearize your support queue☆10Updated this week
- Prototype OMERO.parade implementation using crossfilter.js☆12Feb 14, 2026Updated 8 months ago
- OMERO.web plugin for the Vitessce multimodal data viewer.☆14Jul 29, 2026Updated 3 months ago
- An introduction to OME-Zarr for big bioimaging data☆28Oct 1, 2026Updated 3 weeks ago
- ☆11Jul 15, 2024Updated 2 years ago
- Scientific image analysis resources and software tools.☆49Oct 9, 2026Updated 2 weeks ago
- Core OMERO Scripts☆15Updated this week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Automated batch processing of cell and tissue microscopy image data in Napari☆23Oct 21, 2026Updated last week
- ☆13Feb 5, 2026Updated 8 months ago
- MultiModal Big Image Data Sharing and Exploration☆20Jan 13, 2023Updated 3 years ago
- Materials for the advanced image registration section of the "Advanced methods in bioimage analysis" EMBO 2023 course☆10Sep 15, 2023Updated 3 years ago
- ngio is a Python library to streamline OME-Zarr image analysis workflows.☆53Updated this week
- Visualizing feature measurements on label images in napari☆10Jul 24, 2024Updated 2 years ago
- Code for the paper: Image Denoising and the Generative Accumulation of Photons☆23Aug 2, 2023Updated 3 years ago
- Imagej toolset to ease hyperstacks visualization and handling☆23Feb 9, 2026Updated 8 months ago
- Resources for teaching/preparing to teach bioimage analysis☆65Oct 16, 2026Updated last week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track☆28Jun 5, 2024Updated 2 years ago
- ☆27Sep 11, 2026Updated last month
- ☆15Sep 4, 2026Updated last month
- Computational workflows to assess phototoxicity in live-cell microscopy experiments☆11Aug 11, 2026Updated 2 months ago
- A Fiji/ImageJ plugin to generate ROIs from label images, allowing ROI erosion and quantification☆23Sep 11, 2021Updated 5 years ago
- Interacting Active Surfaces☆10Jul 12, 2022Updated 4 years ago
- Framework for multi-omics data integration by autoencoders☆34Jan 20, 2026Updated 9 months ago