mianalysis / miaLinks
Modular, object-based analysis for ImageJ/Fiji
☆14Updated last week
Alternatives and similar repositories for mia
Users that are interested in mia are comparing it to the libraries listed below
Sorting:
- ☆13Updated 11 months ago
- Speed up coding/extending image analysis in Python.☆35Updated last week
- ilastik plugin for napari☆14Updated last year
- ☆16Updated 3 years ago
- ☆24Updated 2 years ago
- GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.☆43Updated 3 months ago
- A Beginner's guide to microscopy, from sample prep to acquisition, image analysis, and data interpretation☆28Updated last week
- A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, i…☆23Updated 4 months ago
- Accelerated Pixel and Object Classifiers (APOC)☆56Updated 3 weeks ago
- Track and lineage visualization with btrack and Napari☆45Updated 9 months ago
- A 3D interactivity toolbox for napari☆37Updated last month
- GPU-accelerated Image Processing library for Python☆51Updated this week
- Segmentation method able to detect membrane/nuclei-labelled cells with low signal-to-noise ratio and dense packing in 2D and 3D. Availabl…☆33Updated 3 weeks ago
- ☆37Updated this week
- A napari plugin for clustering objects according to their properties.☆87Updated last week
- ☆23Updated last month
- Yet Another Pixel Classifier (based on deep learning)☆35Updated last year
- ☆22Updated last year
- Guides and code for 3D nuclear instance segmentation☆22Updated last month
- Feature extraction for labeled objects in images using regionprops from scikit-image☆51Updated 3 months ago
- A platform for compiling, analyzing, and exploring tracking data☆46Updated 5 months ago
- Collection of useful (to me) python scripts for interacting with napari☆10Updated 2 years ago
- Training resources for Students at Uni Leipzig who want to dive into bio-image data science with Python. The material will develop betwee…☆38Updated last year
- Discover, install, and share napari plugins☆52Updated last month
- A napari plugin for zarr backed OME-NGFF images☆33Updated last week
- Prototype implementation of napari-integrated CNN training viewer☆14Updated 7 months ago
- Process images using SimpleITK in napari☆21Updated 3 months ago
- MiC is an ImageJ plugin to compare segmentation masks☆19Updated 2 months ago
- Visualizing feature measurements on label images in napari☆10Updated last year
- Resources for teaching/preparing to teach bioimage analysis☆58Updated this week