mianalysis / miaLinks
Modular, object-based analysis for ImageJ/Fiji
☆16Updated this week
Alternatives and similar repositories for mia
Users that are interested in mia are comparing it to the libraries listed below
Sorting:
- ☆15Updated 3 years ago
- ☆25Updated 2 years ago
- ilastik plugin for napari☆14Updated last month
- Speed up coding/extending image analysis in Python.☆37Updated 3 weeks ago
- ☆13Updated last year
- Track and lineage visualization with btrack and Napari☆45Updated 4 months ago
- SciCount is tool focused on counting and classifying of objects in image-like data and scientific images, with training and example datas…☆11Updated 2 years ago
- A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, i…☆25Updated 10 months ago
- The known BioVoxxel Toolbox functions now improved for 2D and 3D images☆19Updated 2 months ago
- Segmentation method able to detect membrane/nuclei-labelled cells with low signal-to-noise ratio and dense packing in 2D and 3D. Availabl…☆34Updated 4 months ago
- Accelerated Pixel and Object Classifiers (APOC)☆59Updated 6 months ago
- ☆22Updated 7 months ago
- GPU-accelerated Image Processing library for Python☆53Updated last week
- Visualizing feature measurements on label images in napari☆10Updated last year
- A napari plugin for clustering objects according to their properties.☆90Updated 2 weeks ago
- Resources for teaching/preparing to teach bioimage analysis☆58Updated this week
- Guides and code for 3D nuclear instance segmentation☆22Updated 2 months ago
- GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.☆45Updated 9 months ago
- The repository of NEUBIAS textbook 2021☆11Updated 4 years ago
- A 3D interactivity toolbox for napari☆37Updated 7 months ago
- A multi-dimensional spatial image data structure for scientific Python.☆44Updated 6 months ago
- ☆22Updated 2 years ago
- ☆41Updated this week
- napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool☆61Updated last year
- Advanced Tool for Labeling And Segmentation☆40Updated last year
- A platform for compiling, analyzing, and exploring tracking data☆48Updated last week
- MiC is an ImageJ plugin to compare segmentation masks☆19Updated 8 months ago
- ☆22Updated 2 years ago
- ☆51Updated 9 months ago
- A minimal Python package for reading, writing and validating OME-Zarr (meta)data☆36Updated last week