mianalysis / miaLinks
Modular, object-based analysis for ImageJ/Fiji
☆16Updated this week
Alternatives and similar repositories for mia
Users that are interested in mia are comparing it to the libraries listed below
Sorting:
- ☆16Updated 3 years ago
- Speed up coding/extending image analysis in Python.☆35Updated 3 weeks ago
- ilastik plugin for napari☆14Updated last month
- ☆24Updated 2 years ago
- ☆13Updated last year
- Accelerated Pixel and Object Classifiers (APOC)☆58Updated 2 months ago
- Guides and code for 3D nuclear instance segmentation☆22Updated 3 months ago
- A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, i…☆24Updated 6 months ago
- Resources for teaching/preparing to teach bioimage analysis☆58Updated 3 weeks ago
- GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.☆44Updated 5 months ago
- ☆22Updated 2 years ago
- GPU-accelerated Image Processing library for Python☆51Updated this week
- A Beginner's guide to microscopy, from sample prep to acquisition, image analysis, and data interpretation☆28Updated 2 months ago
- ☆23Updated 3 months ago
- Track and lineage visualization with btrack and Napari☆46Updated 2 weeks ago
- A 3D interactivity toolbox for napari☆37Updated 3 months ago
- Segmentation method able to detect membrane/nuclei-labelled cells with low signal-to-noise ratio and dense packing in 2D and 3D. Availabl…☆33Updated this week
- A napari plugin for clustering objects according to their properties.☆88Updated last week
- Visualizing feature measurements on label images in napari☆10Updated last year
- napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool☆56Updated 11 months ago
- Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets☆27Updated 7 months ago
- MiC is an ImageJ plugin to compare segmentation masks☆19Updated 4 months ago
- ☆35Updated last year
- ☆39Updated last week
- python tools for BigDataViewer☆22Updated 9 months ago
- The known BioVoxxel Toolbox functions now improved for 2D and 3D images☆17Updated 3 months ago
- A collection of useful python utilities from True North Intelligent Algorithms☆41Updated last month
- Yet Another Pixel Classifier (based on deep learning)☆36Updated last year
- Feature extraction for labeled objects in images using regionprops from scikit-image☆52Updated 5 months ago
- ☆22Updated 2 years ago