fmi-faim / napari-psf-analysisView external linksLinks
A napari plugin to analysis point spread functions.
☆12Mar 28, 2025Updated 10 months ago
Alternatives and similar repositories for napari-psf-analysis
Users that are interested in napari-psf-analysis are comparing it to the libraries listed below
Sorting:
- widget for PSF simulation with aberrations☆25Oct 31, 2023Updated 2 years ago
- A Beginner's guide to microscopy, from sample prep to acquisition, image analysis, and data interpretation☆29Nov 13, 2025Updated 3 months ago
- A napari plugin for making image annotation using feature space of vision transformers and Random Forest classifier☆21Nov 24, 2025Updated 2 months ago
- A short course exploring several fun and useful notebooks and Napari widgets for deep learning with SAM, Cellpose, Stardist and friends.☆19Dec 9, 2025Updated 2 months ago
- A minimal dependency napari plugin giving access to scikit-image functions☆23Sep 3, 2025Updated 5 months ago
- A collection of useful python utilities from True North Intelligent Algorithms☆43Feb 2, 2026Updated 2 weeks ago
- Segment images utilizing pre-trained neural networks as feature extractors☆47Jan 21, 2026Updated 3 weeks ago
- Napari training material for a workshop by the CZI funded initiatives LIBRE hub, Napari, and several amazing volunteers☆10Sep 28, 2023Updated 2 years ago
- napari widgets for start-to-finish batch processing☆15Jan 2, 2026Updated last month
- A stable diffusion demo for napari☆11Dec 15, 2023Updated 2 years ago
- Computational workflows to assess phototoxicity in live-cell microscopy experiments☆11Sep 15, 2025Updated 5 months ago
- Spotiflow plugin for napari☆15Feb 2, 2026Updated 2 weeks ago
- Annotation of filaments and other curvilinear structures in 3D.☆12Oct 9, 2023Updated 2 years ago
- A napari plugin to view and edit metadata☆13Feb 1, 2026Updated 2 weeks ago
- Handmade ImageJ / Fiji LUTs for microscopy, scientific good visualization and art.☆13Jan 9, 2025Updated last year
- ☆15Jan 20, 2026Updated 3 weeks ago
- Robust and unbiased estimation of the background distribution for fluorescence microscopy.☆13Oct 13, 2025Updated 4 months ago
- ☆14Updated this week
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆29Updated this week
- Use Napari Viewer to display CZI images☆11May 25, 2022Updated 3 years ago
- ☆12Aug 25, 2021Updated 4 years ago
- ☆16Jul 21, 2023Updated 2 years ago
- Denoising Via Self Supervised Transfer Learning☆13Feb 16, 2021Updated 5 years ago
- ☆14Jan 25, 2024Updated 2 years ago
- Jax implementation of normcorre☆14Jan 25, 2025Updated last year
- Collection of useful (to me) python scripts for interacting with napari☆11Aug 14, 2022Updated 3 years ago
- Visualizing feature measurements on label images in napari☆10Jul 24, 2024Updated last year
- A simple single molecule tracking pipeline with a graphic user interface for quality control.☆13Jan 25, 2024Updated 2 years ago
- A 3D interactivity toolbox for napari☆37Jul 8, 2025Updated 7 months ago
- Denoising via adaptive binning.☆13Jan 6, 2026Updated last month
- The python-microscopy environment - an open-source package for light microscopy☆96Jan 14, 2026Updated last month
- ilastik plugin for napari☆14Dec 15, 2025Updated 2 months ago
- Lab for quantitative bioimage analysis experiments in Python☆19Feb 4, 2026Updated last week
- Accurate and efficient spot detection for microscopy data☆117Feb 5, 2026Updated last week
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆17Jul 7, 2025Updated 7 months ago
- Paint segmentations directly to on-disk/remote zarr arrays☆15Jun 26, 2024Updated last year
- A plugin to read whole slide images within napari.☆21Nov 24, 2025Updated 2 months ago
- ☆18Oct 12, 2019Updated 6 years ago
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆40Apr 21, 2025Updated 9 months ago