Alternatives and similar repositories for MosaicExplorerJ:

Users that are interested in MosaicExplorerJ are comparing it to the libraries listed below

• QI2lab / OPM
  Control, reconstruction, and analysis code for oblique plane microscopy.
  ☆22Updated this week
• saalfeldlab / bigwarp
  A tool for manual pointwise deformable registration using bigdataviewer.
  ☆27Updated 3 weeks ago
• haesleinhuepf / napari-segment-blobs-and-things-with-membranes
  A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…
  ☆25Updated 2 months ago
• SebastienTs / LOBSTER
  Little OBjects Segmentation and Tracking EnviRonment
  ☆9Updated 4 years ago
• BIOP / ijp-LaRoMe
  some useful function to get Label from ROIs and vice versa , and more!
  ☆12Updated last year
• aherbert / gdsc-smlm
  GDSC Single Molecule Light Microscopy ImageJ Plugins
  ☆15Updated 2 months ago
• BiAPoL / Quantitative_Bio_Image_Analysis_with_Python_2022
  This repository hosts notebooks, information and data for the Quantitative Bio-Image Analysis with Python Course 2022.
  ☆15Updated 2 years ago
• UU-cellbiology / ZstackDepthColorCode
  Z-stack Depth Colorcode ImageJ FIJI plugin
  ☆23Updated 3 years ago
• adanog / MSSR
  MSSR Plugin
  ☆12Updated 3 months ago
• tlambert03 / pycudasirecon
  CUDA-accelerated reconstruction for 3D-structured-illumination
  ☆9Updated 6 months ago
• dlegland / mathematical_morphology_with_MorphoLibJ
  A collection of demonstration materials for MorphoLibJ.
  ☆12Updated 2 years ago
• CellMigrationLab / Fast4DReg
  Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…
  ☆39Updated last month
• RoccoDAnt / napari-zelda
  ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari
  ☆20Updated 2 months ago
• fmi-faim / napari-psf-analysis
  A napari plugin to analysis point spread functions.
  ☆9Updated 3 months ago
• guiwitz / napari-convpaint
  Segment images by pixel classification based on pre-trained convolutional layer feature extraction
  ☆26Updated last week
• lacan / microscopy-icons
  Icons describing multiple microscopy techniques, as used by https://www.epfl.ch/research/facilities/ptbiop/equipment/
  ☆11Updated last year
• weigertlab / napari-trackastra
  napari plugin for trackastra
  ☆13Updated 3 months ago
• zoccoler / napari-flim-phasor-plotter
  ☆10Updated 5 months ago
• mesoSPIM / mesoSPIM-control
  Image acquisition software for mesoSPIM light-sheet microscopes.
  ☆38Updated last month
• UU-cellbiology / DoM_Utrecht
  Detection of Molecules plugin for ImageJ, Utrecht University
  ☆15Updated 2 years ago
• quokka79 / DavLUT
  Generates colormaps (lookup tables) for MATLAB & ImageJ
  ☆11Updated 6 years ago
• NEUBIAS / Defragmentation_TrainingSchool_EOSC-Life_2022
  "Defragmentation: bringing BioImage Analysts to the cloud!” training school for the new generation of bioimage analysts. Topics: workflow…
  ☆15Updated last year
• neurobiology-ut / PHILOW
  Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets
  ☆26Updated this week
• mobie / mobie
  MultiModal Big Image Data Sharing and Exploration
  ☆14Updated 2 years ago
• VolkerH / NapariPlayground
  my first baby steps with Napari
  ☆10Updated 5 years ago
• yfukai / laptrack
  Particle tracking by solving linear assignment problem.
  ☆49Updated 3 weeks ago
• JaneliaSciComp / BigStitcher-Spark
  Running compute-intense parts of BigStitcher distributed
  ☆21Updated this week
• HenriquesLab / NanoJ-eSRRF
  ☆19Updated 10 months ago
• multiview-stitcher / multiview-stitcher
  A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.
  ☆61Updated last week
• ekatrukha / BigTrace
  FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets
  ☆28Updated this week