Alternatives and similar repositories for MosaicExplorerJ

Users that are interested in MosaicExplorerJ are comparing it to the libraries listed below

• QI2lab / OPM
  Archived: control, reconstruction, and analysis code for oblique plane microscopy.
  ☆22Updated 6 months ago
• aherbert / gdsc-smlm
  GDSC Single Molecule Light Microscopy ImageJ Plugins
  ☆16Updated last month
• VolkerH / Lattice_Lightsheet_Deskew_Deconv
  Open-source, GPU accelerated code for deskewing and deconvolving lattice light sheet data
  ☆27Updated 5 years ago
• lacan / microscopy-icons
  Icons describing multiple microscopy techniques, as used by https://www.epfl.ch/research/facilities/ptbiop/equipment/
  ☆11Updated 2 years ago
• saalfeldlab / bigwarp
  A tool for manual pointwise deformable registration using bigdataviewer.
  ☆33Updated 3 weeks ago
• UU-cellbiology / ZstackDepthColorCode
  Z-stack Depth Colorcode ImageJ FIJI plugin
  ☆25Updated last month
• imaris / ImarisWriter
  ☆38Updated last year
• BIOP / ijp-LaRoMe
  some useful function to get Label from ROIs and vice versa , and more!
  ☆12Updated 2 years ago
• miura / NEUBIAS_AnalystSchool2020
  ☆13Updated 5 years ago
• yfukai / laptrack
  Particle tracking by solving linear assignment problem.
  ☆58Updated 2 weeks ago
• tlambert03 / pycudasirecon
  CUDA-accelerated reconstruction for 3D-structured-illumination
  ☆10Updated last month
• MSiemons / REALM
  Adaptive Optics plugin for MicroManager
  ☆12Updated 3 years ago
• weigertlab / napari-trackastra
  napari plugin for trackastra
  ☆17Updated 3 weeks ago
• CellMigrationLab / Fast4DReg
  Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…
  ☆40Updated 6 months ago
• VolkerH / NapariPlayground
  my first baby steps with Napari
  ☆10Updated 5 years ago
• haesleinhuepf / napari-segment-blobs-and-things-with-membranes
  A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…
  ☆29Updated 5 months ago
• DylanMuir / ReadImageJROI
  Matlab function to import ROIs from ImageJ
  ☆27Updated 5 years ago
• baigouy / EPySeg
  ☆21Updated last year
• constantinpape / pybdv
  python tools for BigDataViewer
  ☆22Updated 10 months ago
• ekatrukha / BigTrace
  FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets
  ☆30Updated last week
• fmi-faim / napari-psf-analysis
  A napari plugin to analysis point spread functions.
  ☆13Updated 7 months ago
• alecheckert / quot
  A simple single molecule tracking pipeline with a graphic user interface for quality control.
  ☆13Updated last year
• PreibischLab / BigStitcher
  ImgLib2/BDV implementation of Stitching for large datasets
  ☆77Updated last month
• adanog / MSSR
  MSSR Plugin
  ☆14Updated last year
• dlegland / mathematical_morphology_with_MorphoLibJ
  A collection of demonstration materials for MorphoLibJ.
  ☆12Updated 2 years ago
• BiAPoL / Quantitative_Bio_Image_Analysis_with_Python_2022
  This repository hosts notebooks, information and data for the Quantitative Bio-Image Analysis with Python Course 2022.
  ☆16Updated 2 years ago
• Ajaxels / MIB2
  Microscopy Image Browser version 2 is a package for image processing, segmentation and visualization of multi-dimensional (2D-4D) microsc…
  ☆35Updated last month
• RoccoDAnt / napari-zelda
  ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari
  ☆20Updated 11 months ago
• tlambert03 / LLSpy
  Lattice light-sheet post-processing utility.
  ☆29Updated 3 weeks ago
• sakoho81 / miplib
  A Python software library with a variety of functions for (optical) microscopy image restoration, reconstruction and analysis.
  ☆81Updated 2 months ago