Alternatives and similar repositories for code_dmtme

Users that are interested in code_dmtme are comparing it to the libraries listed below

• jsxlei / scCLIP
  ☆33Updated last year
• xy-chen16 / EpiAgent
  A foundation model for single-cell epigenomic data
  ☆56Updated 3 weeks ago
• shapsider / monae
  monae: multi-modal single-cell integration and imputation
  ☆13Updated last year
• OmicsML / CellPLM
  Official repo for CellPLM: Pre-training of Cell Language Model Beyond Single Cells.
  ☆101Updated last year
• HelloWorldLTY / MuSe-GNN
  [NeurIPS 2023] Official codes of "MuSe-GNN: Learning Unified Gene Representation From Multimodal Biological Graph Data"
  ☆30Updated 6 months ago
• Genentech / PerturbQA
  ☆38Updated 4 months ago
• PharMolix / LangCell
  Code for "LangCell: Language-Cell Pre-training for Cell Identity Understanding".
  ☆65Updated last year
• xianglin226 / Benchmarking-Single-Cell-Perturbation
  Single-Cell (Perturbation) Model Library
  ☆89Updated 2 weeks ago
• TencentAILabHealthcare / scPROTEIN
  ☆56Updated last year
• HelloWorldLTY / scELMo
  [Cell Patterns] Codes for paper: scELMo: Embeddings from Language Models are Good Learners for Single-cell Data Analysis
  ☆19Updated 3 months ago
• Boom5426 / Awesome-Virtual-Cell
  Awesome-AI-Virtual-Cell
  ☆163Updated 3 weeks ago
• LiuLab-Bioelectronics-Harvard / UnitedNet
  ☆51Updated last year
• QSong-github / SiGra
  Single-cell spatial elucidation through image-augmented graph transformer
  ☆34Updated 2 years ago
• SuperBianC / scMulan
  Repository for paper scMulan: a multitask generative pre-trained language model for single-cell analysis.
  ☆61Updated last year
• EperLuo / scDiffusion
  A model developed for the generation of scRNA-seq data
  ☆82Updated last week
• OmicsML / dance
  DANCE: a deep learning library and benchmark platform for single-cell analysis
  ☆384Updated last week
• HelloWorldLTY / UKBioLM
  ☆22Updated 3 weeks ago
• siyuh / Squidiff
  ☆114Updated this week
• JackieHanLab / TOSICA
  Transformer for One-Stop Interpretable Cell-type Annotation
  ☆146Updated last year
• QiangweiPeng / stVCR
  Reconstructing spatiotemporal dynamics from spatial transcriptome snapshots
  ☆33Updated 7 months ago
• OmicsML / scMoFormer
  Single-Cell Multimodal Prediction via Transformer
  ☆28Updated last year
• EperLuo / scDiffusion-X
  Diffusion Model for Single-Cell Multiome Data Generation and Analysis
  ☆27Updated last week
• mcgilldinglab / scCross
  A Deep Learning-Based Model for the integration, cross-dataset cross-modality generation, self augmentation and matched multi-omics simul…
  ☆16Updated 5 months ago
• Philyzh8 / scTAG
  "ZINB-based Graph Embedding Autoencoder for Single-cell RNA-seq Interpretations" in AAAI 2022
  ☆25Updated 2 years ago
• yhr91 / GEARS_misc
  ☆25Updated last year
• theislab / nicheformer
  Repository for Nicheformer: a foundation model for single-cell and spatial omics
  ☆149Updated 2 months ago
• rsinghlab / scNODE
  scNODE: Generative Model for Temporal Single Cell Transcriptomic Data Prediction
  ☆29Updated last year
• xianglin226 / scMDC
  Single Cell Multi-omics deep clustering
  ☆28Updated 6 months ago
• xCompass-AI / GeneCompass
  GeneCompass
  ☆109Updated last month
• OSU-BMBL / marsgt
  Multi-omics data analysis for rare population inference using single-cell graph transformer
  ☆22Updated 2 months ago