single cell RNA-seq analysis template based on online resources
☆11Jul 1, 2018Updated 7 years ago
Alternatives and similar repositories for SingleCell_template
Users that are interested in SingleCell_template are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Raw data and analysis of scRNA Seq experiments for the paper Multimodal Mapping of the Immune Landscape in Human Pancreatic Cancer. This …☆15Nov 30, 2020Updated 5 years ago
- Code required to reproduce the analysis made in Kiviaho et al. 2024☆12Nov 29, 2024Updated last year
- Batch-adversarial variational auto-encoder (BAVARIA) for simultaneous dimensionality reduction and integration of single-cell ATAC-seq da…☆15May 15, 2023Updated 2 years ago
- Analysis of RNA epitranscriptome sequencing data with affinity-based shotgun sequencing approach☆10Apr 2, 2020Updated 6 years ago
- Project bulk/single-cell RNA-seq data to given LSI space☆11Jan 17, 2022Updated 4 years ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- scITDG is a tool for identifying time-dependent genes in single-cell sequencing data☆14Nov 24, 2025Updated 4 months ago
- ☆17Jun 5, 2019Updated 6 years ago
- ☆10Jun 5, 2021Updated 4 years ago
- cluster stability measurement by subsampling and reclustering with Seurat V3 and V4☆11Jul 9, 2021Updated 4 years ago
- A public clone of the HypoMap Figure & analysis repository.☆11Sep 26, 2022Updated 3 years ago
- Scripts and data files used to generate the figures of the Crohn's single-cell RNA-seq paper "Single-cell analysis of Crohn’s disease les…☆19Aug 29, 2019Updated 6 years ago
- ☆16Apr 28, 2025Updated 11 months ago
- sougou医学词库爬取☆13Nov 21, 2019Updated 6 years ago
- Robustness and applicability of transcription factor and pathway analysis tools on single-cell RNA-seq data☆29Mar 2, 2020Updated 6 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- HCA data analysis☆19Mar 30, 2021Updated 5 years ago
- ☆21Mar 20, 2017Updated 9 years ago
- A single cell transcriptome atlas of the developing zebrafish hindbrain.☆14Jan 2, 2020Updated 6 years ago
- Installer for Deepin WeChat with Wine☆14Feb 27, 2020Updated 6 years ago
- Axolotl Regenerative Telencehpalon Interpretation via Spatiotemporal Transcriptomic Atlas☆21Jul 3, 2022Updated 3 years ago
- https://gdancik.github.io/shinyGEO/☆25Apr 13, 2021Updated 4 years ago
- The source code and results of performance comparison on the detail of the process among scCATCH, CellAssign, Garnett, SingleR, scMap and…☆14Jan 8, 2023Updated 3 years ago
- This is a collection of link prediction tutorials that I wrote. Some notebooks are accompanied by medium blogposts that you can find here…☆11Jan 16, 2021Updated 5 years ago
- Code and data used in Mollentze et al. (2021) "Identifying and prioritizing potential human-infecting viruses from their genome sequences…☆19Dec 1, 2025Updated 4 months ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆27Jul 30, 2025Updated 8 months ago
- ☆10Jan 22, 2026Updated 2 months ago
- ☆15Oct 10, 2023Updated 2 years ago
- Code for the analysis performed in the paper "Transcription factor stoichiometry, motif affinity and syntax regulate single-cell chromati…☆12Oct 16, 2025Updated 5 months ago
- ☆10Oct 31, 2023Updated 2 years ago
- Dirichlet Process based methods for subclonal reconstruction of tumours☆32Feb 18, 2026Updated last month
- FitDevo: accurate inference of single-cell developmental potential using sample-specific gene weight☆16Apr 7, 2024Updated 2 years ago
- A controllable progress bar with rotating pointer written in shell. 可控进度、带旋转指针的shell进度条☆29Nov 17, 2021Updated 4 years ago
- Publication Page for the Noack et al. 2021 Nature Neuroscience paper☆10Feb 7, 2022Updated 4 years ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A curated list of awesome R frameworks, packages and software.☆14Oct 7, 2015Updated 10 years ago
- ☆19Oct 9, 2017Updated 8 years ago
- Simple scVI implementation☆12Mar 16, 2026Updated 3 weeks ago
- ☆12Nov 2, 2021Updated 4 years ago
- Identification of persistent local patterns in spatial omics data☆14May 6, 2025Updated 11 months ago
- a shell script that can automatically download vscode-server for you.☆29Dec 10, 2023Updated 2 years ago
- code of KBR_TC and KBR_RPCA☆10Nov 8, 2017Updated 8 years ago