Alternatives and similar repositories for BINGO:

Users that are interested in BINGO are comparing it to the libraries listed below

• ManchesterBioinference / GrandPrix
  GrandPrix
  ☆16Updated 5 years ago
• lingfeiwang / findr
  Fast Inference of Networks from Directed Regulations
  ☆21Updated last year
• pkimes / sigclust2
  tests for statistical significance of clustering
  ☆37Updated 6 years ago
• andreaskapou / scMET
  Bayesian modelling of DNA methylation heterogeneity at single-cell resolution
  ☆20Updated last year
• andrewcharlesjones / cplvm
  Contrastive Poisson latent variable models (CPLVMs)
  ☆11Updated 3 years ago
• calico / velodyn
  Dynamical systems methods for RNA velocity analysis
  ☆24Updated 3 years ago
• sbenz / Paradigm
  PAthway Representation and Analysis by Direct Inference on Graphical Models
  ☆44Updated 7 years ago
• cailab-tamu / scTenifoldNet
  A R/MATLAB package to construct and compare gene regulatory networks from single-cell transcriptomic data
  ☆22Updated 2 months ago
• de-Boer-Lab / CisRegModels
  Scripts for building computational models of gene regulation with tensorflow
  ☆27Updated last year
• maclean-lab / RVAgene
  Recurrent Variational Auto gene encoder
  ☆20Updated 2 years ago
• HaohanWang / thePrecisionLasso
  implementation for Precision Lasso: accounting for correlations and linear dependencies in high-dimensional genomic data
  ☆13Updated 4 years ago
• const-ae / transformGamPoi-Paper
  ☆26Updated last year
• HelenaLC / simulation-comparison
  Snakemake workflow to benchmark scRNA-seq data simulators
  ☆13Updated 2 years ago
• CancerRxGene / gdscIC50
  An R package to fit dose response curves for data from the Genomics of Drug Sensitivity of Cancer (GDSC) project.
  ☆25Updated last year
• dcgerard / vicar
  Various Ideas for Confounder Adjustment in Regression
  ☆24Updated last year
• msantolini / dynamo
  DYNamics Agnostic Network MOdels
  ☆18Updated 6 years ago
• canzarlab / JVis-learn
  ☆20Updated 3 years ago
• calico / impulse
  Fit phenomenological sigmoid and impulse curves with priors to improve interpretability
  ☆10Updated 9 months ago
• PhilBoileau / scPCA
  A toolbox for sparse contrastive principal component analysis
  ☆12Updated last month
• stephenslab / fastglmpca
  Fast algorithms for GLM-PCA.
  ☆11Updated 2 weeks ago
• theorod93 / sCCA
  Sparse Canonical Correlation Analysis (sCCA)
  ☆19Updated 3 years ago
• fmicompbio / mutscan
  Software to process, statistically analyse and visualise deep mutational scanning data
  ☆13Updated last month
• KChen-lab / SCMER
  Marker Selection by matching manifolds and elastic net
  ☆23Updated 5 months ago
• CamaraLab / TDA-TCGA
  R package for the identification of cancer-associated mutated genes using gene expression and mutation data.
  ☆10Updated 3 years ago
• shahcompbio / MultiModalMuSig.jl
  A Julia package for extracting mutation signatures using topic models
  ☆18Updated 3 years ago
• RabadanLab / randomly
  A Library for Denoising Single-Cell Data with Random Matrix Theory
  ☆37Updated last year
• PNNL-CompBio / decomprolute
  A suite of scientific workflows to assess metrics to compare efficacy of protein-based tumor deconvolution algorithms.
  ☆16Updated last year
• Bin-Chen-Lab / RGES
  reverse gene expression score
  ☆13Updated last year
• gmiaslab / pyiomica
  PyIOmica (pyiomica) is a Python package for omics analyses.
  ☆15Updated 2 years ago
• zsteve / StationaryOT
  Dynamic inference from single-cell snapshots by optimal transport
  ☆19Updated last year