Alternatives and similar repositories for BINGO:

Users that are interested in BINGO are comparing it to the libraries listed below

• lingfeiwang / findr
  Fast Inference of Networks from Directed Regulations
  ☆22Updated last year
• calico / velodyn
  Dynamical systems methods for RNA velocity analysis
  ☆24Updated 3 years ago
• const-ae / transformGamPoi-Paper
  ☆27Updated last year
• gmiaslab / pyiomica
  PyIOmica (pyiomica) is a Python package for omics analyses.
  ☆15Updated 2 years ago
• KChen-lab / SCMER
  Marker Selection by matching manifolds and elastic net
  ☆23Updated 6 months ago
• cailab-tamu / scTenifoldNet
  A R/MATLAB package to construct and compare gene regulatory networks from single-cell transcriptomic data
  ☆23Updated 4 months ago
• stephenslab / fastglmpca
  Fast algorithms for GLM-PCA.
  ☆14Updated last month
• ManchesterBioinference / GrandPrix
  GrandPrix
  ☆16Updated 5 years ago
• andreaskapou / scMET
  Bayesian modelling of DNA methylation heterogeneity at single-cell resolution
  ☆22Updated last year
• HelenaLC / simulation-comparison
  Snakemake workflow to benchmark scRNA-seq data simulators
  ☆13Updated 2 years ago
• andrewcharlesjones / cplvm
  Contrastive Poisson latent variable models (CPLVMs)
  ☆11Updated 3 years ago
• de-Boer-Lab / CisRegModels
  Scripts for building computational models of gene regulation with tensorflow
  ☆27Updated 2 years ago
• anna-neufeld / countsplit
  ☆21Updated last year
• saezlab / decoupleRBench
  Package to benchmark methods from decoupleR
  ☆9Updated 2 years ago
• PNNL-CompBio / decomprolute
  A suite of scientific workflows to assess metrics to compare efficacy of protein-based tumor deconvolution algorithms.
  ☆16Updated last year
• sbenz / Paradigm
  PAthway Representation and Analysis by Direct Inference on Graphical Models
  ☆44Updated 7 years ago
• krassowski / gsea-api
  Pandas API for multiple Gene Set Enrichment Analysis implementations in Python (GSEApy, cudaGSEA, GSEA)
  ☆15Updated 2 years ago
• TomKellyGenetics / graphsim
  R package: Simulate Expression data from igraph network using mvtnorm (CRAN; JOSS)
  ☆24Updated last week
• kuijjerlab / retriever
  Generate Robust Disease-Specific Response Signatures from the LINCS-L1000 Data
  ☆14Updated 3 years ago
• dcgerard / vicar
  Various Ideas for Confounder Adjustment in Regression
  ☆24Updated 2 years ago
• pmelsted / AM_2024
  Analaysis for the batch correction paper
  ☆10Updated 2 weeks ago
• GSEA-MSigDB / ssGSEA-gpmodule
  A GenePattern module for running the ssGSEA method
  ☆13Updated 2 months ago
• matsengrp / sumrep
  Summary statistics for repertoires
  ☆17Updated 2 years ago
• pkimes / sigclust2
  tests for statistical significance of clustering
  ☆38Updated 6 years ago
• waldronlab / SingleCellMultiModal
  Single Cell multimodal data scripts for downloading datasets
  ☆17Updated this week
• Oshlack / splatter-paper
  Data and analysis for the Splatter paper
  ☆29Updated 7 years ago
• aristoteleo / Scribe-py
  Regulatory networks with Direct Information in python
  ☆40Updated 2 years ago
• swoodhouse / SCNS-Toolkit
  Single cell network synthesis toolkit
  ☆23Updated 4 years ago
• fmicompbio / mutscan
  Software to process, statistically analyse and visualise deep mutational scanning data
  ☆14Updated 2 months ago
• ELELAB / MoonlightR
  ☆17Updated 11 months ago