AtteAalto / BINGOLinks
☆12Updated 3 years ago
Alternatives and similar repositories for BINGO
Users that are interested in BINGO are comparing it to the libraries listed below
Sorting:
- ☆14Updated last year
- Fast Inference of Networks from Directed Regulations☆22Updated last year
- Recurrent Variational Auto gene encoder☆20Updated 2 years ago
- Netbooks is a JupyterHub catalog of use cases in gene regulatory network inference using netZoo methods..☆44Updated last month
- Dynamical systems methods for RNA velocity analysis☆24Updated 4 years ago
- A R/MATLAB package to construct and compare gene regulatory networks from single-cell transcriptomic data☆24Updated 10 months ago
- Fit phenomenological sigmoid and impulse curves with priors to improve interpretability☆10Updated last year
- ☆20Updated 4 years ago
- Dynamic inference from single-cell snapshots by optimal transport☆19Updated last year
- Scripts for building computational models of gene regulation with tensorflow☆27Updated 2 years ago
- Snakemake workflow to benchmark scRNA-seq data simulators☆14Updated 3 years ago
- A Library for Denoising Single-Cell Data with Random Matrix Theory☆37Updated 2 years ago
- A suite of scientific workflows to assess metrics to compare efficacy of protein-based tumor deconvolution algorithms.☆16Updated last year
- An R package for single-cell CRISPR screen data analysis emphasizing statistical rigor, massive scalability, and ease of use.☆34Updated 2 months ago
- Regulatory networks with Direct Information in python☆40Updated 2 years ago
- SignalingProfiler is a pipeline that builds signaling networks to cellular phenotypes from multiomics data.☆15Updated last month
- ☆12Updated last year
- Single cell network synthesis toolkit☆23Updated 4 years ago
- SINCERITIES is a tool for inferring gene regulatory networks from time-stamped cross-sectional single cell transcriptional expression pro…☆13Updated 8 years ago
- scMODAL: A general deep learning framework for single-cell Multi-Omics Data Alignment with feature Links☆18Updated 5 months ago
- Variant impact phenotyping using Perturb-seq☆10Updated last year
- MOJITOO: a fast and universal method for integration of multimodal single cell data☆11Updated last year
- ☆21Updated 2 years ago
- Bayesian modelling of DNA methylation heterogeneity at single-cell resolution☆23Updated last year
- Sparse Canonical Correlation Analysis (sCCA)☆20Updated 3 years ago
- ☆18Updated 8 years ago
- R package for the identification of cancer-associated mutated genes using gene expression and mutation data.☆11Updated 4 years ago
- epigenome analysis to rank transcription factors☆14Updated 5 years ago
- R package: Simulate Expression data from igraph network using mvtnorm (CRAN; JOSS)☆24Updated 6 months ago
- ☆15Updated 3 years ago