mbassalbioinformatics / ChIP-APLinks
An Integrated Analysis Pipeline for Unbiased ChIP seq Analysis
☆22Updated 10 months ago
Alternatives and similar repositories for ChIP-AP
Users that are interested in ChIP-AP are comparing it to the libraries listed below
Sorting:
- ☆15Updated 3 years ago
- Identifying genome-wide translated open reading frames using ribosome profiling☆23Updated 2 years ago
- ☆23Updated 6 months ago
- Main repository for Drews et al. (Nature, 2022)☆42Updated 2 years ago
- Scripts to import your FeatureCounts output into DEXSeq☆34Updated 6 years ago
- Filtering of PDX samples for mouse derived reads☆28Updated 2 years ago
- GREAT Analysis - Functional Enrichment on Genomic Regions☆90Updated 5 months ago
- binned motif enrichment analysis and visualisation☆41Updated 3 weeks ago
- ☆31Updated 8 months ago
- A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions☆39Updated 3 years ago
- An R interface to the MEME Suite☆52Updated 2 months ago
- ☆19Updated 2 years ago
- Define regions in the genome☆32Updated 3 years ago
- CLIP-seq Analysis of Multi-mapped reads☆31Updated 4 years ago
- Sigflow: Streamline Analysis Workflows for Mutational Signatures, https://github.com/ShixiangWang/sigflow/pkgs/container/sigflow☆27Updated 10 months ago
- ☆13Updated 9 years ago
- ☆23Updated 4 years ago
- An R package to time somatic mutations☆62Updated 4 years ago
- A continually expanding collection of RNA-seq tools☆51Updated 10 months ago
- ☆38Updated 2 years ago
- A statistical tool to detect differential alternative splicing events using single-cell RNA-seq☆22Updated 2 years ago
- processes GoT amplicon data and generates a table of metrics☆31Updated 3 years ago
- Comprehensive analysis of small RNA sequencing data☆32Updated 3 months ago
- A single cell sequencing read simulator.☆33Updated 10 months ago
- MAnorm2 for Normalizing and Comparing ChIP-seq Samples☆32Updated 2 years ago
- EasyFuse is a pipeline for accurate fusion gene detection from RNA-seq data.☆60Updated 8 months ago
- Cellsnake tool main repo☆33Updated last year
- RNA editing tests☆17Updated 4 years ago
- Peak caller for CUT&TAG data☆29Updated 3 years ago
- An R package for Splice-aware quantification of translation using Ribo-seq data☆19Updated last year