Code for the analyses in the human reference interactome paper.
☆28Dec 8, 2022Updated 3 years ago
Alternatives and similar repositories for HuRI_paper
Users that are interested in HuRI_paper are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Collection of tools to retrieve siRNA (small interfering RNA) candidate sequences targeting your gene of interest from popular siRNA desi…☆20Nov 22, 2022Updated 3 years ago
- Jupyter notebook repository for reproducing analysis in "DNA Methylation Landscape of the Mouse Brain at Single-Cell Resolution"☆14Apr 1, 2020Updated 6 years ago
- Load bioinformatics datasets into a local database☆11Apr 8, 2025Updated last year
- A public clone of the HypoMap Figure & analysis repository.☆11Sep 26, 2022Updated 3 years ago
- Wrapper R scripts for performing a weighted-gene co-expression network analysis (WGCNA)☆30Jul 26, 2015Updated 10 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Estimate PTM hotspots in protein sequence alignments☆15Feb 6, 2019Updated 7 years ago
- A tutorial for the free Inkscape cross-platform vector graphics editor.☆13Oct 4, 2016Updated 9 years ago
- Code to run OncoSig Analyses☆18Sep 30, 2020Updated 5 years ago
- Code to reproduce analysis and figures for 'Genetic mapping of etiologic brain cell types for obesity' (Timshel, eLife 2020)☆14May 20, 2021Updated 4 years ago
- Whole genome focused array SNP typer☆14Feb 2, 2026Updated 2 months ago
- Bioinformatics projects and code shared by Zhi John Lu☆10Jun 3, 2021Updated 4 years ago
- ☆15Sep 20, 2022Updated 3 years ago
- ☆15May 31, 2020Updated 5 years ago
- SPLICE-q -- A Python tool for genome-wide SPLIcing Efficiency quantification from RNA-seq data.☆12Sep 15, 2023Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Multifastats: Multi-Fasta Sequence Stats. Free python-based program that, from a set of a set of 'fasta' sequences (as group or individua…☆10Feb 21, 2018Updated 8 years ago
- Modeling framework for eTRANSAFE project☆13Aug 6, 2025Updated 8 months ago
- exRNA Biomarker Discovery for Liquid Biopsy☆13Oct 29, 2020Updated 5 years ago
- Immune evasion before tumor invasion in early squamous lung cell carcinogenesis☆17Jul 19, 2021Updated 4 years ago
- Tutorials for the InterMine Python web client☆14Jun 1, 2022Updated 3 years ago
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Apr 22, 2019Updated 6 years ago
- Computational biology utility scripts☆19Apr 16, 2025Updated last year
- Cross Modality Optimal Transport for multimodal inference☆10Nov 29, 2024Updated last year
- Collection of useful methods for single cell analysis☆15Aug 22, 2024Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- kallisto | bustools workflow for pre-processing single-cell RNA-seq data☆120Mar 10, 2026Updated last month
- Data-driven chemical-induced toxicity prediction by machine learning using chemical and bioactivity data☆10Feb 7, 2017Updated 9 years ago
- ☆11Apr 8, 2026Updated last week
- HUMOS is a web application aimed to help teaching Orbitrap mass spectrometry. HUMOS models a mass spectrum of a peptide mixture allowing …☆11Mar 10, 2025Updated last year
- Source code for ScanGEO Shiny App☆15Apr 18, 2022Updated 3 years ago
- mist R package files☆10May 5, 2025Updated 11 months ago
- High-Dimensional Gene Expression and Morphology Profiles of Cells across 28,000 Genetic and Chemical Perturbations☆55Aug 11, 2025Updated 8 months ago
- A convolutional neural network to predict PPI interactions☆42Oct 9, 2018Updated 7 years ago
- DS100 Course Website Homepage☆13Mar 23, 2026Updated 3 weeks ago
- Serverless GPU API endpoints on Runpod - Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- DeepProfile framework, which learns a variational autoencoder (VAE) network from a vast quantity of publicly available gene expression sa…☆19Jun 7, 2018Updated 7 years ago
- Group-DIA, a software for analyzing multiple DIA data files☆13Dec 5, 2016Updated 9 years ago
- Harmonise GWAS summary statistics against a reference VCF☆41Jun 15, 2021Updated 4 years ago
- H. Bengtsson, A Unifying Framework for Parallel and Distributed Processing in R using Futures, The R Journal, 10.32614/RJ-2021-048, 2021☆10Jan 24, 2026Updated 2 months ago
- python based queries for the proteomesoflife neo4j network database☆14Jun 17, 2020Updated 5 years ago
- Trainable representation analysis study repository☆44Apr 5, 2022Updated 4 years ago
- ☆15Feb 27, 2026Updated last month