Code for the analyses in the human reference interactome paper.
☆28Dec 8, 2022Updated 3 years ago
Alternatives and similar repositories for HuRI_paper
Users that are interested in HuRI_paper are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Jupyter notebook repository for reproducing analysis in "DNA Methylation Landscape of the Mouse Brain at Single-Cell Resolution"☆14Apr 1, 2020Updated 6 years ago
- Load bioinformatics datasets into a local database☆11Apr 8, 2025Updated last year
- A public clone of the HypoMap Figure & analysis repository.☆12Sep 26, 2022Updated 3 years ago
- Wrapper R scripts for performing a weighted-gene co-expression network analysis (WGCNA)☆30Jul 26, 2015Updated 10 years ago
- R package for functionally scoring phosphorylation sites☆22Nov 3, 2019Updated 6 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Estimate PTM hotspots in protein sequence alignments☆15Feb 6, 2019Updated 7 years ago
- Implementation of "Accurate classification of protein subcellular localization from high throughput microscopy images using deep learning…☆13Oct 19, 2022Updated 3 years ago
- A tutorial for the free Inkscape cross-platform vector graphics editor.☆13Oct 4, 2016Updated 9 years ago
- Code to run OncoSig Analyses☆18Sep 30, 2020Updated 5 years ago
- Code to reproduce analysis and figures for 'Genetic mapping of etiologic brain cell types for obesity' (Timshel, eLife 2020)☆14May 20, 2021Updated 5 years ago
- ☆12Jan 27, 2022Updated 4 years ago
- ☆26Oct 27, 2017Updated 8 years ago
- A Python workflow to study protein-protein coevolution and interaction☆21Jun 30, 2017Updated 9 years ago
- Bioinformatics projects and code shared by Zhi John Lu☆10Jun 3, 2021Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆16Sep 20, 2022Updated 3 years ago
- ✂️ Trim sequencing adapters from NGS data automatically☆14Sep 5, 2025Updated 10 months ago
- SPLICE-q -- A Python tool for genome-wide SPLIcing Efficiency quantification from RNA-seq data.☆11Sep 15, 2023Updated 2 years ago
- Multifastats: Multi-Fasta Sequence Stats. Free python-based program that, from a set of a set of 'fasta' sequences (as group or individua…☆11Feb 21, 2018Updated 8 years ago
- Modeling framework for eTRANSAFE project☆13Aug 6, 2025Updated 11 months ago
- exRNA Biomarker Discovery for Liquid Biopsy☆11Oct 29, 2020Updated 5 years ago
- Immune evasion before tumor invasion in early squamous lung cell carcinogenesis☆17Jul 19, 2021Updated 4 years ago
- Tutorials for the InterMine Python web client☆14Jun 1, 2022Updated 4 years ago
- pDeepXL: MS/MS spectrum prediction for cross-linked peptide pairs by deep learning☆13Feb 8, 2021Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Apr 22, 2019Updated 7 years ago
- Computational biology utility scripts☆19Apr 16, 2025Updated last year
- Cross Modality Optimal Transport for multimodal inference☆10Nov 29, 2024Updated last year
- Collection of useful methods for single cell analysis☆15Aug 22, 2024Updated last year
- ☆11Nov 11, 2023Updated 2 years ago
- ☆10Jul 4, 2019Updated 7 years ago
- kallisto | bustools workflow for pre-processing single-cell RNA-seq data☆121Mar 10, 2026Updated 3 months ago
- ☆13Sep 1, 2020Updated 5 years ago
- HUMOS is a web application aimed to help teaching Orbitrap mass spectrometry. HUMOS models a mass spectrum of a peptide mixture allowing …☆11Mar 10, 2025Updated last year
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Source code for ScanGEO Shiny App☆15Apr 18, 2022Updated 4 years ago
- mist R package files☆10May 5, 2025Updated last year
- High-Dimensional Gene Expression and Morphology Profiles of Cells across 28,000 Genetic and Chemical Perturbations☆55Aug 11, 2025Updated 10 months ago
- A convolutional neural network to predict PPI interactions☆42Oct 9, 2018Updated 7 years ago
- DS100 Course Website Homepage☆13Jun 22, 2026Updated 2 weeks ago
- Serves a web interface and RESTful API for reference genome assets.☆12Apr 11, 2026Updated 2 months ago
- Group-DIA, a software for analyzing multiple DIA data files☆13Dec 5, 2016Updated 9 years ago