mircare / Brewery
State-of-the-art ab initio prediction of 1D protein structure annotations
☆14Updated 3 years ago
Related projects ⓘ
Alternatives and complementary repositories for Brewery
- ☆14Updated 8 years ago
- Next-generation PRALINE sequence alignment program.☆9Updated 5 years ago
- antimicrobial peptide prediction in R☆27Updated last year
- Machine learning workflows for analyzing high-throughput protein data☆24Updated 7 years ago
- Untargeted metabolomics workflow for large-scale data processing and analysis implemented in Snakemake☆24Updated 7 months ago
- phylogenetic analyses informed by deep mutational scanning data☆14Updated 5 months ago
- A graphical interface for sklearn classification to introduce machine learning to biologists☆11Updated 2 years ago
- Open source short linear motif discovery and sequence analysis☆23Updated 2 months ago
- ☆20Updated 10 months ago
- Maximum likelihood structural phylogenetics by including Foldseek 3Di characters. Supporting Information for Puente-Lelievre et al. 2023n…☆18Updated 4 months ago
- DeepSig - Predictor of signal peptides in proteins based on deep learning☆25Updated last year
- Comprehensive Python client for the Uniprot REST API☆44Updated 3 months ago
- ☆12Updated last week
- Comparison of Adaptive Immune Receptor Repertoires☆25Updated last year
- Deep learning model to predict degron sequences☆18Updated last year
- Evolutionary conservation estimation of residues or nucleotides☆33Updated 2 years ago
- uorf4u is a bioinformatics tool for conserved upstream ORF annotation.☆13Updated last year
- SARS-CoV-2 RBD antibody escape calculator☆11Updated this week
- Template-based RNA secondary structure visualization☆25Updated this week
- A Bio2BEL package for integrating pathway-related information from KEGG in BEL☆13Updated 2 years ago
- Practical Introduction to Bioinformatics and Systems Biology with R (mainly)☆19Updated 14 years ago
- Clustering the NCBI nr database with mmseq2 (90% length, 90% identity). Inspired by the NCBI's experimental ClusteredNR database.☆23Updated last year
- Parse NCBI CD-search results to find and visualise the domain architecture of secondary metabolite synthases☆20Updated 2 years ago
- A Python package for mapping sequence aligned data onto protein structures☆34Updated 3 years ago
- A package for designing activity-informed nucleic acid diagnostics for viruses.☆29Updated last year
- Calculates pairwise sequence identity, similarity and normalized similarity score of proteins in a multiple sequence alignment.☆14Updated 9 months ago
- Pre-processing of mass spectrometry-based metabolomics data with quantification and identification based on MS1 and MS2 data.☆16Updated last month
- Python bindings for the TaxonKit library☆31Updated 3 months ago
- Detects hotspot regions for somatic mutations in 3D protein structures☆2Updated 8 months ago
- An Improved Algorithm to Measure the Semantic Similarity of Gene Ontology Terms☆17Updated 4 years ago