duolinwang / MusiteDeep_web
This repository contains the stand-alone tool for MusiteDeep server
☆33Updated 4 years ago
Alternatives and similar repositories for MusiteDeep_web:
Users that are interested in MusiteDeep_web are comparing it to the libraries listed below
- ☆24Updated 3 years ago
- Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".☆57Updated 3 years ago
- An unofficial re-implementation of AntiBERTy, an antibody-specific protein language model, in PyTorch.☆24Updated last year
- ☆24Updated last year
- ☆36Updated 2 months ago
- Mutation effects predicted from sequence co-variation☆63Updated 7 years ago
- ☆21Updated 2 months ago
- ☆25Updated 10 months ago
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆82Updated last year
- Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks☆28Updated 9 months ago
- Machine learning prediction of enzyme optimum pH☆29Updated 2 weeks ago
- ☆39Updated this week
- Python package for peptide sequence generation, peptide descriptor calculation and sequence analysis.☆57Updated 2 weeks ago
- A domain parser for Alphafold models☆34Updated last year
- This repository contains code for the paper: "Tertiary motifs as building blocks for the design of protein-binding peptides"☆16Updated last year
- RNA Multiple Sequence Alignment☆36Updated last year
- ☆34Updated 2 months ago
- An antibody-specific language model focusing on NGL prediction☆26Updated 7 months ago
- ☆19Updated 9 months ago
- Collecting AMP MIC data from different sources, then running a GAN to output promising sequences☆71Updated 7 months ago
- Code and data used in https://doi.org/10.1101/2021.08.01.454656☆53Updated 2 years ago
- Python package for analysis of antibody heavy and light chains☆25Updated 4 years ago
- Predict the structure of immune receptor proteins☆48Updated 4 months ago
- Machine learning models for antibody sequences in PyTorch☆39Updated 3 years ago
- A foundation model approach to guide antimicrobial peptide design in the era of artificial intelligence driven scientific discovery☆20Updated 2 weeks ago
- Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity☆28Updated 3 weeks ago
- ☆49Updated this week
- Prediction of binding residues for metal ions, nucleic acids, and small molecules.☆32Updated 3 months ago
- Active Learning-Assisted Directed Evolution for Protein Engineering☆44Updated 4 months ago
- Fast deep learning methods for large-scale protein-protein interaction screening☆36Updated 5 months ago