pytorch dataloaders for single-cell perturbation data
☆47Jul 18, 2026Updated this week
Alternatives and similar repositories for cell-load
Users that are interested in cell-load are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Comprehensive suite for evaluating perturbation prediction models☆146Jul 14, 2026Updated last week
- State is a machine learning model that predicts cellular perturbation response across diverse contexts☆621Updated this week
- parallel differential expression for single-cell perturbation sequencing☆25Jul 14, 2026Updated last week
- Modeling complex perturbations with CellFlow☆151Updated this week
- cz-benchmarks is a package for standardized evaluation and comparison of machine learning models for biological applications.☆56Dec 19, 2025Updated 7 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Stack is a single-cell foundation model that enables in-context learning at inference time.☆141Apr 28, 2026Updated 2 months ago
- scDFM: Distributional Flow Matching for Robust Single-Cell Perturbation Prediction (ICLR 2026)☆42Apr 22, 2026Updated 2 months ago
- Arc Virtual Cell Atlas☆557Jul 1, 2026Updated 2 weeks ago
- MaxToki: an autoregressive single-cell language model built on BioNeMo/NeMo/Megatron.☆28May 7, 2026Updated 2 months ago
- Official implementation of "CellFlux: Simulating Cellular Morphology Changes via Flow Matching" (ICML 2025)☆42Sep 3, 2025Updated 10 months ago
- Reproduce analyses and baselines from the State paper☆16Jun 29, 2026Updated 3 weeks ago
- single-cell latent diffusion model☆57Jul 13, 2026Updated last week
- Tahoe-x1 is a single cell foundation model designed for gigascale datasets☆158Jun 3, 2026Updated last month
- The Compositional Perturbation Autoencoder (CPA) is a deep generative framework to learn effects of perturbations at the single-cell leve…☆149Aug 14, 2024Updated last year
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- UCE is a zero-shot foundation model for single-cell gene expression data☆309Jul 8, 2026Updated last week
- PULSAR: a Foundation Model for Multi-scale and Multicellular Biology☆36Mar 1, 2026Updated 4 months ago
- pseudobulking on an AnnData object☆37Jun 17, 2026Updated last month
- ☆51Jun 16, 2025Updated last year
- ☆52Apr 7, 2026Updated 3 months ago
- A model developed for the generation of scRNA-seq data☆94Jan 21, 2026Updated 6 months ago
- GEARS is a geometric deep learning model that predicts outcomes of novel multi-gene perturbations☆383Feb 1, 2025Updated last year
- A repository for reproducing experiments from the TxPert paper☆41Mar 25, 2026Updated 3 months ago
- ☆18Oct 22, 2025Updated 8 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Minibatch loading for on-disk anndata files, co-developed by Lamin Labs and scverse☆67Jul 14, 2026Updated last week
- A Predictive World Model of the Transcriptome☆34Oct 18, 2025Updated 9 months ago
- Benchmarking pipeline for single-cell perturbation prediction tools☆34Jul 11, 2025Updated last year
- Group-wise release of ProtiCelli, including core code deveplopment.☆24Jun 12, 2026Updated last month
- scDataset: Scalable Data Loading for Deep Learning on Large-Scale Single-Cell Omics☆51Jan 30, 2026Updated 5 months ago
- ☆69Jan 14, 2026Updated 6 months ago
- A curated repository designed to serve as a comprehensive guide for researchers interested in the intersection of Transformer models and …☆44Dec 18, 2024Updated last year
- Learning Single-Cell Perturbation Responses using Neural Optimal Transport☆176Oct 31, 2024Updated last year
- Benchmarking gene embeddings on single, paired, and gene set tasks☆21Nov 29, 2025Updated 7 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- LLM agents for working with the SRA and associated bioinformatics databases.☆177May 22, 2026Updated last month
- Single-cell perturbation analysis☆338Updated this week
- a dataloader to work with large single cell datasets from lamindb☆41May 20, 2026Updated 2 months ago
- ☆18Apr 23, 2026Updated 2 months ago
- ☆89Feb 17, 2026Updated 5 months ago
- BioDiscoveryAgent is an LLM-based AI agent for closed-loop design of genetic perturbation experiments☆114Jul 6, 2025Updated last year
- Context specific and dynamic gene regulatory network reconstruction and analysis☆129Jun 22, 2026Updated 3 weeks ago