Single Cell Multi-omics deep clustering
☆30Jul 1, 2025Updated last year
Alternatives and similar repositories for scMDC
Users that are interested in scMDC are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆18Sep 13, 2022Updated 3 years ago
- ☆12Nov 19, 2023Updated 2 years ago
- scAce: an adaptive embedding and clustering method for scRNA-seq data☆12Sep 8, 2023Updated 2 years ago
- ☆24Nov 6, 2021Updated 4 years ago
- scGMAI: a Gaussian mixture model for clustering single-cell RNA-seq data based on deep autoencoder☆15Jun 7, 2021Updated 5 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- An offical repo for paper "Single-cells are Spatial Tokens: Transformers for Spatially Resolved Transcriptomics Data Imputation"☆18Aug 11, 2023Updated 2 years ago
- scDCC: Single Cell Deep Constrained Clustering☆45Jul 10, 2024Updated last year
- single-cell graph attentional clustering☆13Feb 10, 2022Updated 4 years ago
- ☆12Oct 19, 2024Updated last year
- ☆17Jun 6, 2022Updated 4 years ago
- The software of Pamona, a partial manifold alignment algorithm.☆23Mar 21, 2021Updated 5 years ago
- SAME (Single-cell RNA-seq Aggregated clustering via Mixture model Ensemble): Cluster ensemble for single-cell RNA-seq data☆16May 4, 2021Updated 5 years ago
- SMILE: Mutual Information Learning for Integration of Single Cell Omics Data☆11Mar 28, 2023Updated 3 years ago
- ☆23Dec 8, 2023Updated 2 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- ☆15Jun 17, 2021Updated 5 years ago
- CLEAR: Self-supervised contrastive learning for integrative single-cell RNA-seq data analysis☆34Nov 30, 2022Updated 3 years ago
- scDeepCluster for Single Cell RNA-seq data☆106Jul 10, 2024Updated last year
- Semi-parametric simulation of bulk and single cell RNA-seq data☆10Nov 17, 2024Updated last year
- Identify spatial domain☆92May 29, 2025Updated last year
- ☆12Dec 4, 2023Updated 2 years ago
- Single-cell RNA-seq clustering and annotation☆13Oct 26, 2020Updated 5 years ago
- The main repository for ACTIVA: realistic single-cell RNA-seq generation with automatic cell-type identification using introspective vari…☆10Jan 23, 2023Updated 3 years ago
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆19Dec 19, 2024Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- [BIB 2023] scDFC: A deep fusion clustering method for single-cell RNA-seq data☆10Nov 27, 2025Updated 7 months ago
- Simultaneous deep generative modeling and clustering of single cell genomic data☆33Nov 14, 2022Updated 3 years ago
- Batch alignment of single-cell transcriptomics data using deep metric learning☆25Feb 5, 2024Updated 2 years ago
- ☆36Apr 15, 2025Updated last year
- scGNN (single cell graph neural networks) for single cell clustering and imputation using graph neural networks☆155Jul 25, 2024Updated last year
- Detect key Units in mosaic Tandem Repeats from representative reads from the same locus☆10Aug 2, 2023Updated 2 years ago
- Research Paper: "Graph Contrastive Learning as a Versatile Foundation for Advanced scRNA-seq Data Analysis"☆10Nov 20, 2024Updated last year
- ☆10Mar 11, 2025Updated last year
- scTM: A package for topic modelling in transcriptomics data☆26May 1, 2024Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- pytorch dataloaders for single-cell perturbation data☆45Jun 29, 2026Updated last week
- Bayesian Consensus Clustering, packaged up from code by Eric F. Lock☆19Jun 15, 2023Updated 3 years ago
- ☆56Oct 29, 2022Updated 3 years ago
- Novel joint clustering method with scRNA-seq and CITE-seq data☆10Jun 22, 2021Updated 5 years ago
- ☆160Mar 19, 2024Updated 2 years ago
- scMODAL: A general deep learning framework for single-cell Multi-Omics Data Alignment with feature Links☆23Jun 10, 2025Updated last year
- A pipeline for Smooth-seq data analysis.☆10Sep 23, 2021Updated 4 years ago