Alternatives and similar repositories for scMDC

Users that are interested in scMDC are comparing it to the libraries listed below

• jlakkis / sciPENN
  ☆18Updated 3 years ago
• XLearning-SCU / scBridge
  ☆21Updated last year
• YangLabHKUST / Portal
  Adversarial domain translation networks for integrating large-scale atlas-level single-cell datasets
  ☆33Updated 2 years ago
• OSU-BMBL / scDEAL
  Deep Transfer Learning of Drug Sensitivity by Integrating Bulk and Single-cell RNA-seq data
  ☆55Updated last year
• PYangLab / Matilda
  Matilda is a multi-task framework for learning from single-cell multimodal omics data. Matilda leverages the information from the multi-m…
  ☆21Updated 3 months ago
• OSU-BMBL / deepmaps
  Single-cell biological network inference using a heterogeneous graph transformer
  ☆73Updated 6 months ago
• YangLabHKUST / SpatialScope
  A unified approach for integrating spatial and single-cell transcriptomics data by leveraging deep generative models
  ☆73Updated last year
• zpliulab / GENELink
  ☆34Updated 3 years ago
• QSong-github / scGCN
  scGCN is a graph convolutional networks algorithm for knowledge transfer in single cell omics
  ☆41Updated 3 years ago
• drieslab / spatial-datasets
  overview of spatial datasets
  ☆76Updated last year
• tabdelaal / SpaGE
  Enhancing spatial transcriptomics data by predicting the expression of unmeasured genes from a dissociated scRNA-seq data
  ☆36Updated last year
• QuKunLab / MultiomeBenchmarking
  ☆50Updated 6 months ago
• JinmiaoChenLab / SpatialGlue
  SpatialGlue is a novel deep learning methods for spatial multi-omics data integration.
  ☆67Updated last year
• JinmiaoChenLab / Batch-effect-removal-benchmarking
  A benchmark of batch-effect correction methods for single-cell RNA sequencing data
  ☆79Updated 3 years ago
• zhanglab-wbgcas / STGRNS
  ☆29Updated 2 years ago
• bm2-lab / scMVP
  ☆32Updated 4 months ago
• theislab / scib-reproducibility
  Additional code and analysis from the single-cell integration benchmarking project
  ☆67Updated 2 years ago
• Su-informatics-lab / DSTG
  Deconvoluting Spatial Transcriptomics Data through Graph-based Artificial Intelligence
  ☆39Updated 3 years ago
• labomics / midas
  PyTorch implementation of the MIDAS algorithm for single-cell multimodal data integration (Nature Biotechnology 2024).
  ☆59Updated last week
• mexchy1000 / CellDART
  domain adaptation of spatial and single-cell transcriptome
  ☆27Updated 11 months ago
• lizhen18THU / PAST
  PAST: a Prior-based self-Attention method for Spatial Transcriptomics
  ☆12Updated 6 months ago
• QuKunLab / SPACEL
  ☆59Updated last year
• HantaoShu / DeepSEM
  ☆85Updated 2 years ago
• suinleelab / contrastiveVI
  ☆56Updated last year
• SydneyBioX / scJoint
  ☆60Updated 2 years ago
• zhouzilu / cTPnet
  cTPnet Package
  ☆25Updated 3 years ago
• melobio / Concerto-reproducibility
  ☆39Updated 2 years ago
• mcgilldinglab / scCross
  A Deep Learning-Based Model for the integration, cross-dataset cross-modality generation, self augmentation and matched multi-omics simul…
  ☆15Updated 3 weeks ago
• datapplab / AutoClass
  ☆44Updated 3 years ago
• PeterZZQ / scMoMaT
  ☆21Updated last year