BioDiscoveryAgent is an LLM-based AI agent for closed-loop design of genetic perturbation experiments
☆105Jul 6, 2025Updated 9 months ago
Alternatives and similar repositories for BioDiscoveryAgent
Users that are interested in BioDiscoveryAgent are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A standard library for biological research.☆36Sep 2, 2025Updated 8 months ago
- pytorch dataloaders for single-cell perturbation data☆44Apr 24, 2026Updated last week
- ☆341May 23, 2025Updated 11 months ago
- The SAIL blog☆13Apr 23, 2026Updated last week
- Arc Virtual Cell Atlas☆515Feb 12, 2026Updated 2 months ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Protein prediction models implemented with Modal☆32Apr 27, 2026Updated last week
- Polygraph evaluates and compares groups of nucleic acid sequences based on their sequence and functional content for effective design of …☆40Mar 27, 2025Updated last year
- Evaluation dataset for AI systems intended to benchmark capabilities foundational to scientific research in biology☆105Sep 27, 2025Updated 7 months ago
- [ICML 24] Robust Optimization in Protein Fitness Landscapes Using Reinforcement Learning in Latent Space☆16Aug 9, 2024Updated last year
- ☆26Mar 30, 2026Updated last month
- Evaluation suite for transcriptomic perturbation effect prediction models. Includes support for single-cell foundation models.☆37Jul 29, 2025Updated 9 months ago
- UCE is a zero-shot foundation model for single-cell gene expression data☆253Feb 26, 2026Updated 2 months ago
- Code space for 'Evaluation of large language models for discovery of gene set function'☆42Dec 17, 2024Updated last year
- A curated list of LLM powered AI Agents in Biomedical Research. Medical Image Analysis, Multi-omics Genomics Analysis, Biomedical Scienti…☆74Sep 28, 2025Updated 7 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A modular tool for proportion analysis in single-cell sequencing data☆25Feb 26, 2026Updated 2 months ago
- Repo for our work "Systematic Evaluation of Large Vision-Language Models for Surgical Artificial Intelligence"☆20Jun 2, 2025Updated 11 months ago
- Awesome generative spatial omics tools☆25Oct 17, 2025Updated 6 months ago
- ☆15Aug 24, 2022Updated 3 years ago
- Pytorch implementation of DeepNovoV2, a state-of-the-art de novo peptide sequencing model.☆27May 21, 2019Updated 6 years ago
- De novo peptide sequencing for DDA and DIA by deep learning☆40Nov 26, 2020Updated 5 years ago
- A Deep Learning-Based Model for the integration, cross-dataset cross-modality generation, self augmentation and matched multi-omics simul…☆16Aug 9, 2025Updated 8 months ago
- Biological foundation modeling from molecular to genome scale☆1,505Mar 20, 2026Updated last month
- Pytorch Implmentation of Meta Attack via Contrastive Surrogate Objective☆12May 21, 2024Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Diffusion model for gene regulatory network inference.☆28Mar 20, 2026Updated last month
- LLM for genomic☆14Feb 23, 2024Updated 2 years ago
- ☆16Oct 18, 2023Updated 2 years ago
- Modeling complex perturbations with CellFlow☆137Apr 27, 2026Updated last week
- ☆56Apr 20, 2025Updated last year
- LitQA Eval: A difficult set of scientific questions that require context of full-text research papers to answer☆45Dec 18, 2024Updated last year
- Machine learning methods for DNA sequence analysis.☆63Feb 27, 2026Updated 2 months ago
- Flexible analysis of high-content CRISPR screening☆32Mar 6, 2026Updated last month
- ☆40Feb 24, 2026Updated 2 months ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- State is a machine learning model that predicts cellular perturbation response across diverse contexts☆567Apr 23, 2026Updated last week
- BioKGBench: A Knowledge Graph Checking Benchmark of AI Agent for Biomedical Science☆24Oct 14, 2024Updated last year
- Web-Scarping tool for downloading the content of the following publishers: Elsevier, RSC, Web of Science, Springer Nature , Wiley.☆40Jun 24, 2025Updated 10 months ago
- Top Life Sciences open-source software☆21Jun 9, 2024Updated last year
- Spatiotemporal identification of druggable binding sites using deep learning☆22Mar 16, 2021Updated 5 years ago
- ProCyon: A multimodal foundation model for protein phenotypes☆57Nov 25, 2025Updated 5 months ago
- SciQAG is a novel framework for automatically generating high-quality science question-answer pairs from a large corpus of scientific lit…☆34Mar 24, 2025Updated last year