Alternatives and similar repositories for BioDiscoveryAgent:

Users that are interested in BioDiscoveryAgent are comparing it to the libraries listed below

• bowang-lab / Orthrus
  Orthrus is a mature RNA model for RNA property prediction. It uses a mamba encoder backbone, a variant of state-space models specifical…
  ☆58Updated last month
• zjunlp / ChatCell
  ChatCell: Facilitating Single-Cell Analysis with Natural Language
  ☆48Updated last year
• mims-harvard / PDGrapher
  Combinatorial prediction of therapeutic perturbations using causally-inspired neural networks
  ☆23Updated 3 months ago
• Genentech / iterative-perturb-seq
  Sequential Optimal Experimental Design of Perturbation Screens Guided by Multimodal Priors
  ☆39Updated 9 months ago
• zou-group / virtual-lab
  A virtual lab of LLM agents for science research
  ☆146Updated last month
• vandijklab / cell2sentence
  Cell2Sentence: Teaching Large Language Models the Language of Biology
  ☆45Updated 3 months ago
• genbio-ai / AIDO
  AI-Driven Digital Organism (AIDO) is a system of multiscale foundation models for predicting, simulating and programming biology at all l…
  ☆69Updated 2 months ago
• microsoft / zero-shot-scfoundation
  ☆57Updated 6 months ago
• Sanofi-Public / CodonBERT
  Repository for mRNA Paper and CodonBERT publication.
  ☆125Updated 9 months ago
• snap-stanford / KGWAS
  KGWAS: novel genetics discovery enabled by massive functional genomics knowledge graph
  ☆56Updated last week
• bowang-lab / genomic-FM
  ☆21Updated 2 months ago
• etowahadams / interprot
  ☆99Updated 2 weeks ago
• Bitbol-Lab / ProtMamba-ssm
  ProtMamba: a homology-aware but alignment-free protein state space model
  ☆56Updated 4 months ago
• jsxlei / scCLIP
  ☆27Updated last year
• frederikkemarin / BEND
  Benchmarking DNA Language Models on Biologically Meaningful Tasks
  ☆109Updated 4 months ago
• aristoteleo / awesome-bioagent-papers
  Agent self-driven repository on bio-agent papers, i.e. papers on LLM-based agents in biology and medicine.
  ☆28Updated this week
• mims-harvard / ProCyon
  ProCyon: A multimodal foundation model for protein phenotypes
  ☆29Updated 2 weeks ago
• mims-harvard / PINNACLE
  Contextual AI models for single-cell protein biology
  ☆79Updated last month
• Future-House / LAB-Bench
  Evaluation dataset for AI systems intended to benchmark capabilities foundational to scientific research in biology
  ☆40Updated last month
• TencentAI4S / CD-GPT
  A Biological Foundation Model Bridging the Gap between Molecular Sequences Through Central Dogma
  ☆23Updated last week
• liugangcode / InfoAlign
  The code for "Learning Molecular Representation in a Cell"
  ☆23Updated 2 weeks ago
• chenkenbio / SpliceBERT
  Primary RNA sequence model
  ☆35Updated 10 months ago
• KatarinaYuan / awesome-single-cell-foundation
  Paper collection for single cell foundation models
  ☆30Updated last year
• TencentAILabHealthcare / DNAGPT
  ☆40Updated last year
• OmicsML / CellPLM
  Official repo for CellPLM: Pre-training of Cell Language Model Beyond Single Cells.
  ☆78Updated 11 months ago
• mims-harvard / SPECTRA
  SPECTRA: Spectral framework for evaluation of biomedical AI models
  ☆37Updated last week
• aaronwtr / PertEval
  Evaluation suite for transcriptomic perturbation effect prediction models. Includes support for single-cell foundation models.
  ☆20Updated last month
• keiserlab / exceiver
  ☆11Updated last year