yuhui-zh15 / CellFluxLinks
Official implementation of "CellFlux: Simulating Cellular Morphology Changes via Flow Matching" (ICML 2025)
☆12Updated last month
Alternatives and similar repositories for CellFlux
Users that are interested in CellFlux are comparing it to the libraries listed below
Sorting:
- A Modular Architecture for Deep Learning Systems☆43Updated 3 months ago
- ☆36Updated 10 months ago
- ☆116Updated 3 months ago
- RITA is a family of autoregressive protein models, developed by LightOn in collaboration with the OATML group at Oxford and the Debora Ma…☆99Updated 2 years ago
- This repo contains the results data for Round 1 of Adaptyv Bio’s EGFR Protein Design Competition.☆34Updated 8 months ago
- AI-Driven Digital Organism (AIDO) is a system of multiscale foundation models for predicting, simulating and programming biology at all l…☆121Updated last month
- Contrastive learning harmonizing protein language models and natural language models☆33Updated last year
- Code associated with "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."☆70Updated last year
- Contrasting Sequence with Structure: Pre-training Graph Representations with PLMs☆24Updated last year
- ☆123Updated last year
- The code for "Learning Molecular Representation in a Cell"☆36Updated 5 months ago
- A repository for reproducing experiments from the TxPert paper☆14Updated 3 months ago
- Lbster: Language models for Biological Sequence Transformation and Evolutionary Representation☆128Updated this week
- SPECTRA: Spectral framework for evaluation of biomedical AI models☆40Updated 5 months ago
- ☆46Updated last month
- ☆11Updated last year
- Protein structure datasets for machine learning.☆111Updated 4 months ago
- Sequential Optimal Experimental Design of Perturbation Screens Guided by Multimodal Priors☆40Updated last year
- Open source code for AlphaFold to extract protein embeddings☆27Updated 4 years ago
- A pretrained single cell gene expression language model☆12Updated 2 years ago
- A diffusion model for structure-based drug design with faster inference from learned representations of protein structure.☆29Updated last year
- a Transformer-based neural network for generating highly optimized protein sequences called Regularized Latent Space Optimization (RELSO)☆89Updated 2 years ago
- Evaluation dataset for AI systems intended to benchmark capabilities foundational to scientific research in biology☆81Updated last month
- reasoning model trained using GRPO towards rosetta REF2015 for protein stability☆89Updated last month
- Combinatorial prediction of therapeutic perturbations using causally-inspired neural networks☆28Updated 3 months ago
- ☆58Updated last year
- Official repository for discrete Walk-Jump Sampling (dWJS)☆53Updated last year
- Repository for the paper "Optimal design of stochastic DNA synthesis protocols based on generative sequence models" (Weinstein et al., AI…☆34Updated 3 years ago
- ☆66Updated 10 months ago
- ☆26Updated 5 years ago