COmmon COordinate FRAMEwork in R
☆42May 19, 2020Updated 6 years ago
Alternatives and similar repositories for cocoframer
Users that are interested in cocoframer are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A GUI tool for easy and smooth visualisation and analysis of Spatial Transcriptomics datasets☆11Mar 4, 2025Updated last year
- Code to reproduce analyses of mouse cortical gradients☆10Feb 27, 2019Updated 7 years ago
- A GUI and library for doing multi-fiber photometry☆19Oct 12, 2017Updated 9 years ago
- ☆47Jun 18, 2026Updated 3 months ago
- MagellanMapper is a graphical interface for 3D bioimage annotation, atlas registration, and regional quantification☆23Mar 30, 2026Updated 6 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ABBA - Aligning Big Brains and Atlases (2D sections to 3D atlas registration)☆61Oct 4, 2026Updated last week
- Multichannel Igor Electrophysiology Suite☆30Updated this week
- Meshing operations on triangular meshes (surface registration, selection, visualizations, etc.)☆23Jun 26, 2025Updated last year
- ☆18Feb 10, 2022Updated 4 years ago
- A Matlab GUI for rendering 3D mouse brain structures☆22May 30, 2020Updated 6 years ago
- R package for segmentation, registration and generating web-based brain atlases from microscope images☆93Jul 16, 2021Updated 5 years ago
- A Bonsai interface for real-time markerless pose estimation using DeepLabCut☆55Jun 1, 2025Updated last year
- ☆19Aug 20, 2018Updated 8 years ago
- Developing a Brain Atlas through Deep Learning☆53Aug 9, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- DataJoint pipeline for IBL project☆20Dec 15, 2022Updated 3 years ago
- A Python package to visualise neuroanatomical data in atlas space☆678Oct 6, 2026Updated last week
- Generate a matrix of predictors corresponding to different behavioral variables and process a regression-based encoding model to obtain t…☆18Jul 14, 2019Updated 7 years ago
- This toolbox includes routines for using principal component analysis (PCA) and independent component analysis (ICA) to extract cellular …☆27Aug 18, 2018Updated 8 years ago
- SimBA (Simple Behavioral Analysis): a pipeline and GUI for developing supervised behavioral classifiers from any major pose-estimation to…☆379Updated this week
- R package to infer spatial location of neuronal subpopulations within the developing mouse brain by integrating single-cell RNA-seq data …☆17Jul 15, 2015Updated 11 years ago
- TENASPIS☆10Feb 15, 2021Updated 5 years ago
- Code and results from TotalSeqC antibody titration and pipeline benchmarking for CITE-seq experiments☆10Mar 13, 2021Updated 5 years ago
- How to use Aligning Big Brains and Atlases with Python☆14May 3, 2023Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆31Jun 16, 2023Updated 3 years ago
- A head-mounted camera system integrates detailed behavioral monitoring with multichannel electrophysiology in freely moving mice☆29Jul 27, 2021Updated 5 years ago
- This repository contains the code used for the paper "Molecular Atlas of the Adult Mouse Brain".☆16Feb 26, 2021Updated 5 years ago
- Python package for multi-electrode array handling and stimulation☆13Jun 9, 2025Updated last year
- Scripts related to VISp and ALM scRNA-seq and FISH analysis for Tasic, et al., 2018.☆24Jun 15, 2018Updated 8 years ago
- IBL core shared libraries☆69Updated this week
- ☆15Sep 27, 2022Updated 4 years ago
- ClearMap is a python toolbox for the analysis and registration of volumetric data from cleared tissues.☆53Jun 18, 2020Updated 6 years ago
- Create 3D/4D animations using a natural language-based syntax☆60Jun 6, 2025Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Shiny app for visualization, exploration of mouse brain single cell gene expression☆12Oct 31, 2018Updated 7 years ago
- R interface to the Bio-Formats library☆27May 1, 2024Updated 2 years ago
- a GFA toolkit☆13Oct 4, 2024Updated 2 years ago
- Compares various time-series feature sets on computational performance, within-set structure, and between-set relationships.☆11Jun 3, 2022Updated 4 years ago
- A python package which aligns histology to the Allen Brain Atlas and Waxholm rat atlas using deep learning.☆132Sep 8, 2026Updated last month
- quantification of behavior across chronic social defeat stress☆11Jun 30, 2022Updated 4 years ago
- non-parametric inference for convolutional filters in poisson glms☆13Sep 20, 2021Updated 5 years ago