Alternatives and similar repositories for BrainMesh

Users that are interested in BrainMesh are comparing it to the libraries listed below

• djoshea / neuropixel-utils
  Utilities for managing Neuropixel datasets and Kilosort results
  ☆48Updated 7 months ago
• openlists / SpikeResources
  An open list of tools & resources for 'spikes': recordings of single-unit neural activity (action potentials).
  ☆32Updated 3 years ago
• cortex-lab / allenCCF
  Tools to work with Allen Inst CCF data in matlab
  ☆143Updated 5 months ago
• petersaj / AP_histology
  Histology processing
  ☆71Updated 3 weeks ago
• petersaj / neuropixels_trajectory_explorer
  Neuropixels trajectory explorer with the Allen CCF mouse atlas
  ☆79Updated 8 months ago
• wildrootlab / SHARCQ
  Tools to register histological section images and cell count locations to mouse brain atlas
  ☆28Updated 3 years ago
• buzsakilab / buzcode
  Code for internal lab sharing - polishing has started but is by no means complete
  ☆131Updated 2 years ago
• bahanonu / ciatah
  CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…
  ☆99Updated last year
• anoushkajain / UnitRefine
  UnitRefine is a machine-learning toolbox that simplifies spike sorting curation by reducing manual curation.
  ☆64Updated last week
• int-brain-lab / iblapps
  pyqt5 dependent applications for IBL sessions
  ☆32Updated 3 months ago
• billkarsh / SpikeGLX
  SpikeGLX recording system GUI [Neuropixels NI]
  ☆100Updated this week
• billkarsh / CatGT
  SpikeGLX postprocessing [tshift filter CAR fix join extract]
  ☆13Updated last week
• SpikeInterface / spiketutorials
  Tutorials for using SpikeInterface on extracellular datasets.
  ☆68Updated 2 years ago
• VirtualBrainLab / Pinpoint
  Multi-probe trajectory planning in an intuitive 3D environment
  ☆56Updated last week
• Coen-Lab / chronic-neuropixels
  CAD files for the Apollo Implant: a device for Chronic Neuropixels Implantation
  ☆30Updated last month
• cortex-lab / neuropixels
  Information about Neuropixels electrode arrays
  ☆96Updated last year
• DeNardoLab / BehaviorDEPOT
  Repository for BehaviorDEPOT pipeline app files and source code
  ☆38Updated this week
• JinghaoLu / MIN1PIPE
  A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.
  ☆63Updated last year
• Julie-Fabre / awesome_neuropixels
  A curated list of awesome Neuropixels resources.
  ☆121Updated 3 weeks ago
• m-beau / NeuroPyxels
  NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…
  ☆139Updated 3 weeks ago
• petersenpeter / CellExplorer
  CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…
  ☆111Updated 3 months ago
• zivlab / CellReg
  Registration of cells across sessions.
  ☆75Updated last year
• sanworks / Bpod_Gen2
  Repository for 2nd generation Bpod platform (formerly beta branch of Bpod repository)
  ☆40Updated last month
• Whitlock-Group / HERBS
  ☆52Updated last year
• petersenpeter / phy2-plugins
  Plugins for Phy2
  ☆19Updated 7 months ago
• open-ephys / Bonsai.Miniscope
  Bonsai package for controlling headborne, calcium imaging miniscopes
  ☆12Updated last year
• cortex-lab / spikes
  cortex lab code for electrophysiology
  ☆85Updated last year
• denisecailab / minian
  miniscope analysis pipeline with interactive visualizations
  ☆97Updated last year
• cortex-lab / sortingQuality
  Functions to assess quality of spike sorting results
  ☆34Updated 2 years ago
• EnnyvanBeest / UnitMatch
  Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days
  ☆73Updated 2 weeks ago