deisseroth-lab / multifiberLinks
A GUI and library for doing multi-fiber photometry
☆18Updated 7 years ago
Alternatives and similar repositories for multifiber
Users that are interested in multifiber are comparing it to the libraries listed below
Sorting:
- Tools to register histological section images and cell count locations to mouse brain atlas☆28Updated 3 years ago
- Tools to work with Allen Inst CCF data in matlab☆140Updated 2 months ago
- Extract regions of interest based on correlated pixel intensity☆24Updated 8 years ago
- Fiber Photometry Modular Analysis Tool Suite☆40Updated 4 years ago
- A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.☆62Updated last year
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆52Updated 2 years ago
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆95Updated 10 months ago
- Calcium Data Extraction and Analysis☆45Updated 2 years ago
- Registration of cells across sessions.☆75Updated last year
- Histology processing☆69Updated last week
- ☆12Updated 9 years ago
- ☆52Updated last year
- miniscope analysis pipeline with interactive visualizations☆95Updated last year
- Generate a matrix of predictors corresponding to different behavioral variables and process a regression-based encoding model to obtain t…☆18Updated 6 years ago
- Free, platform independent, behavior tracking software.☆139Updated 2 months ago
- An open-source ecosystem of hardware and software for head-fixed behavior☆12Updated 4 months ago
- Repository for BehaviorDEPOT pipeline app files and source code☆38Updated 11 months ago
- spike extraction from calcium signals (Deneux et al., 2016)☆32Updated 5 years ago
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆76Updated 5 months ago
- ☆19Updated last year
- R Scripts to analyze deep lab cut point data and related data☆67Updated 2 years ago
- A curated list of awesome Neuropixels resources.☆110Updated last month
- Constrained Nonnegative Matrix Factorization for microEndoscopic data☆147Updated last year
- EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…☆77Updated 9 months ago
- Guided Photometry Analysis in Python, a free and open-source FP analysis tool.☆77Updated this week
- SpikeGLX recording system GUI [Neuropixels NI]☆94Updated last week
- Match suite2p ROIs between imaging sessions☆27Updated 6 years ago
- Tools for processing 2P recordings☆127Updated last year
- Fiber photometry analysis☆22Updated 5 months ago
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆151Updated 3 weeks ago