deisseroth-lab / multifiberLinks
A GUI and library for doing multi-fiber photometry
☆18Updated 8 years ago
Alternatives and similar repositories for multifiber
Users that are interested in multifiber are comparing it to the libraries listed below
Sorting:
- Tools to register histological section images and cell count locations to mouse brain atlas☆28Updated 3 years ago
- Tools to work with Allen Inst CCF data in matlab☆143Updated 4 months ago
- Extract regions of interest based on correlated pixel intensity☆24Updated 8 years ago
- ☆52Updated last year
- Registration of cells across sessions.☆75Updated last year
- Histology processing☆71Updated 2 months ago
- Repository for BehaviorDEPOT pipeline app files and source code☆38Updated last year
- A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.☆63Updated last year
- ☆12Updated 9 years ago
- Calcium Data Extraction and Analysis☆48Updated 3 years ago
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆55Updated 2 years ago
- Fiber Photometry Modular Analysis Tool Suite☆42Updated 4 years ago
- miniscope analysis pipeline with interactive visualizations☆96Updated last year
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆99Updated last year
- Guided Photometry Analysis in Python, a free and open-source FP analysis tool.☆81Updated this week
- Free, platform independent, behavior tracking software.☆143Updated 5 months ago
- R Scripts to analyze deep lab cut point data and related data☆70Updated 2 years ago
- Calcium imaging inter-session alignment☆14Updated last month
- SpikeGLX recording system GUI [Neuropixels NI]☆99Updated last week
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆79Updated 7 months ago
- Fiber photometry analysis☆22Updated last week
- Bonsai package for controlling headborne, calcium imaging miniscopes☆12Updated last year
- Generate a matrix of predictors corresponding to different behavioral variables and process a regression-based encoding model to obtain t…☆18Updated 6 years ago
- Multi-probe trajectory planning in an intuitive 3D environment☆56Updated 3 weeks ago
- spike extraction from calcium signals (Deneux et al., 2016)☆32Updated 5 years ago
- An open-source ecosystem of hardware and software for head-fixed behavior☆13Updated 2 months ago
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆157Updated 3 weeks ago
- Neuroscience/electrophsyiology data analysis tools (mostly Matlab)☆14Updated 6 years ago
- ☆19Updated last year
- Tools for processing 2P recordings☆130Updated 2 years ago