Alternatives and similar repositories for encodingmodel

Users that are interested in encodingmodel are comparing it to the libraries listed below

• gloewing / photometry_FLMM
  Code for Functional Mixed Models for Fiber Photometry
  ☆13Updated last month
• joao-semedo / communication-subspace
  Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)
  ☆47Updated 5 years ago
• wildrootlab / SHARCQ
  Tools to register histological section images and cell count locations to mouse brain atlas
  ☆28Updated 3 years ago
• ikinsella / locaNMF
  Pytorch implementation of LocaNMF
  ☆36Updated 5 years ago
• tjd2002 / tjd-shared-code
  Neuroscience/electrophsyiology data analysis tools (mostly Matlab)
  ☆14Updated 6 years ago
• zivlab / island
  Revealing neural correlates of behavior without behavioral measurements
  ☆15Updated 5 years ago
• cortex-lab / allenCCF
  Tools to work with Allen Inst CCF data in matlab
  ☆140Updated 2 months ago
• murthylab / GLMHMM
  ☆24Updated 5 years ago
• bahanonu / ciatah
  CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…
  ☆94Updated 10 months ago
• MLspike / spikes
  spike extraction from calcium signals (Deneux et al., 2016)
  ☆32Updated 5 years ago
• deisseroth-lab / multifiber
  A GUI and library for doing multi-fiber photometry
  ☆18Updated 7 years ago
• SjulsonLab / methods_class
  "Approaches to Study Neural Circuits" course
  ☆66Updated 9 months ago
• zebrain-lab / Toolbox-Romano-et-al
  Computational toolbox for analysis of calcium imaging data of neuronal populations
  ☆33Updated 2 years ago
• int-brain-lab / iblapps
  pyqt5 dependent applications for IBL sessions
  ☆28Updated 2 weeks ago
• cortex-lab / sortingQuality
  Functions to assess quality of spike sorting results
  ☆34Updated 2 years ago
• kohth / cilds
  Dimensionality reduction of calcium-imaged neuronal population activity
  ☆15Updated 2 years ago
• zhoupc / CNMF_E
  Constrained Nonnegative Matrix Factorization for microEndoscopic data
  ☆147Updated last year
• RichieHakim / ROICaT
  Region Of Interest Classification and Tracking
  ☆25Updated last week
• zhoupc / OASIS_matlab
  ☆40Updated 3 years ago
• denisecailab / minian
  miniscope analysis pipeline with interactive visualizations
  ☆95Updated last year
• nicholas-roy / psytrack
  ☆54Updated 6 months ago
• int-brain-lab / ibllib
  IBL core shared libraries
  ☆63Updated this week
• pillowlab / BinaryPursuitSpikeSorting
  Detect synchronous and overlapped spikes in extracellular recordings using Binary Pursuit (Pillow et al 2013)
  ☆12Updated 10 years ago
• Whitlock-Group / HERBS
  ☆52Updated last year
• HelmchenLabSoftware / Cascade
  Calibrated inference of spiking from calcium ΔF/F data using deep networks
  ☆151Updated 2 weeks ago
• zivlab / CellReg
  Registration of cells across sessions.
  ☆75Updated last year
• GiocomoLab / ln-model-of-mec-neurons
  Code implements the LN model used to describe spike trains of MEC neurons based on the animal's position, head direction, speed, and thet…
  ☆23Updated 3 years ago
• kushalkolar / MESmerize
  Platform for Calcium Imaging analysis. DEPRECATED.
  ☆62Updated last year
• petersaj / AP_histology
  Histology processing
  ☆69Updated this week
• LorenFrankLab / spyglass
  Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF
  ☆103Updated this week