bonsai-rx / deeplabcutLinks
A Bonsai interface for real-time markerless pose estimation using DeepLabCut
☆53Updated 7 months ago
Alternatives and similar repositories for deeplabcut
Users that are interested in deeplabcut are comparing it to the libraries listed below
Sorting:
- A gui for browsing joint calcium imaging + behavioral data.☆54Updated 11 months ago
- miniscope analysis pipeline with interactive visualizations☆97Updated last year
- Closed-loop behavioral experiment toolkit using pose estimation of body parts.☆61Updated 2 years ago
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆181Updated 5 months ago
- ☆52Updated last year
- "Approaches to Study Neural Circuits" course☆65Updated last year
- Match suite2p ROIs between imaging sessions☆27Updated 6 years ago
- Registration of cells across sessions.☆75Updated last year
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆158Updated 2 months ago
- Histology processing☆72Updated last month
- Repository for BehaviorDEPOT pipeline app files and source code☆38Updated last week
- A tool for drawing ROIs on videos and analysing deeplabcut videos.☆35Updated 4 years ago
- Behavioral segmentation of open field in DeepLabCut, or B-SOID ("B-side"), is a pipeline that pairs unsupervised pattern recognition with…☆203Updated last year
- Tools to work with Allen Inst CCF data in matlab☆143Updated 6 months ago
- Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.☆71Updated this week
- Multi-probe trajectory planning in an intuitive 3D environment☆56Updated 2 weeks ago
- a module for kinematic analysis of deeplabcut outputs☆149Updated 2 years ago
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆139Updated last month
- Various scripts to support deeplabcut and what to do afterwards!☆158Updated 6 months ago
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆80Updated 9 months ago
- R Scripts to analyze deep lab cut point data and related data☆70Updated 2 years ago
- pynapple collaborative data analysis (high level python scripts)☆38Updated last month
- Fiber Photometry Modular Analysis Tool Suite☆42Updated 4 years ago
- a visualization method for neural data☆241Updated 9 months ago
- Configurable acquisition from multiple FLIR/Point Grey camera using Bonsai and Python to h264 compress the video on the GPU.☆15Updated 10 months ago
- a Python API to record video & system timestamps from Imaging Source USB cameras☆68Updated 2 years ago
- ☆117Updated 5 months ago
- IBL core shared libraries☆66Updated this week
- Demo code for CAPTURE and DANNCE☆29Updated 4 years ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆62Updated 2 years ago