bonsai-rx / deeplabcutLinks
A Bonsai interface for real-time markerless pose estimation using DeepLabCut
☆51Updated 2 months ago
Alternatives and similar repositories for deeplabcut
Users that are interested in deeplabcut are comparing it to the libraries listed below
Sorting:
- Closed-loop behavioral experiment toolkit using pose estimation of body parts.☆60Updated 2 years ago
- A gui for browsing joint calcium imaging + behavioral data.☆52Updated 6 months ago
- ☆52Updated 11 months ago
- miniscope analysis pipeline with interactive visualizations☆95Updated last year
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆173Updated 2 weeks ago
- Repository for BehaviorDEPOT pipeline app files and source code☆38Updated 10 months ago
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆127Updated last month
- Histology processing☆67Updated 3 weeks ago
- A tool for drawing ROIs on videos and analysing deeplabcut videos.☆33Updated 4 years ago
- "Approaches to Study Neural Circuits" course☆66Updated 7 months ago
- a module for kinematic analysis of deeplabcut outputs☆141Updated last year
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆150Updated this week
- Behavioral segmentation of open field in DeepLabCut, or B-SOID ("B-side"), is a pipeline that pairs unsupervised pattern recognition with…☆200Updated last year
- Fiji pipeline for automated serial section reconstruction and mouse brain analysis.☆29Updated last year
- Registration of cells across sessions.☆75Updated 11 months ago
- IBL core shared libraries☆63Updated this week
- Multi-probe trajectory planning in an intuitive 3D environment☆56Updated 3 weeks ago
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆76Updated 3 months ago
- Demo code for CAPTURE and DANNCE☆29Updated 4 years ago
- Tools to work with Allen Inst CCF data in matlab☆138Updated 3 weeks ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆61Updated last year
- DLC2Action is an action segmentation package that makes running and tracking of machine learning experiments easy.☆26Updated last year
- NEural MOdelS, a statistical modeling framework for neuroscience.☆101Updated last week
- Configurable acquisition from multiple FLIR/Point Grey camera using Bonsai and Python to h264 compress the video on the GPU.☆15Updated 5 months ago
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆104Updated 7 months ago
- Modified Python 3.0 implementation of MotionMapper (https://github.com/gordonberman/MotionMapper)☆29Updated last month
- Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF☆102Updated this week
- A MATLAB toolbox for running behavioral neuroscience experiments and managing data☆33Updated last year
- a Python API to record video & system timestamps from Imaging Source USB cameras☆67Updated 2 years ago
- Toolbox for analyzing behavioral videos and neural activity☆59Updated last year