bonsai-rx / deeplabcutLinks
A Bonsai interface for real-time markerless pose estimation using DeepLabCut
☆52Updated 6 months ago
Alternatives and similar repositories for deeplabcut
Users that are interested in deeplabcut are comparing it to the libraries listed below
Sorting:
- A gui for browsing joint calcium imaging + behavioral data.☆54Updated 10 months ago
- Closed-loop behavioral experiment toolkit using pose estimation of body parts.☆61Updated 2 years ago
- miniscope analysis pipeline with interactive visualizations☆96Updated last year
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆181Updated 4 months ago
- ☆52Updated last year
- Repository for BehaviorDEPOT pipeline app files and source code☆38Updated last year
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆157Updated 2 weeks ago
- Behavioral segmentation of open field in DeepLabCut, or B-SOID ("B-side"), is a pipeline that pairs unsupervised pattern recognition with…☆202Updated last year
- A tool for drawing ROIs on videos and analysing deeplabcut videos.☆35Updated 4 years ago
- Registration of cells across sessions.☆75Updated last year
- Histology processing☆71Updated 2 months ago
- "Approaches to Study Neural Circuits" course☆65Updated 11 months ago
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆111Updated last month
- Variational Animal Motion Embedding - A tool for time series embedding and clustering☆197Updated last year
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆79Updated 7 months ago
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆138Updated 5 months ago
- Multi-probe trajectory planning in an intuitive 3D environment☆56Updated 3 weeks ago
- a visualization method for neural data☆239Updated 8 months ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆62Updated 2 years ago
- IBL core shared libraries☆65Updated this week
- A MATLAB toolbox for running behavioral neuroscience experiments and managing data☆32Updated last year
- Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.☆71Updated this week
- Tools to work with Allen Inst CCF data in matlab☆143Updated 4 months ago
- ☆115Updated 3 months ago
- Region Of Interest Classification and Tracking☆27Updated this week
- Code accompanying Steinmetz et al., 2019☆60Updated 4 years ago
- Various scripts to support deeplabcut and what to do afterwards!☆156Updated 5 months ago
- A head-mounted camera system integrates detailed behavioral monitoring with multichannel electrophysiology in freely moving mice☆28Updated 4 years ago
- Match suite2p ROIs between imaging sessions☆27Updated 6 years ago
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆99Updated last year