katemartian / Photometry_data_processingLinks
☆28Updated 2 years ago
Alternatives and similar repositories for Photometry_data_processing
Users that are interested in Photometry_data_processing are comparing it to the libraries listed below
Sorting:
- Code for Functional Mixed Models for Fiber Photometry☆13Updated 5 months ago
- miniscope analysis pipeline with interactive visualizations☆98Updated last year
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆139Updated last week
- pyqt5 dependent applications for IBL sessions☆32Updated 3 months ago
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆80Updated 9 months ago
- ☆52Updated last year
- Fiber Photometry Modular Analysis Tool Suite☆42Updated 4 years ago
- CodeOcean capsule for full electrophysiology analysis pipeline using Kilosort2.5 via SpikeInterface.☆13Updated last year
- Fiber photometry data preprocessing - denoising, photobleaching and motion correction.☆27Updated 2 years ago
- Repository for BehaviorDEPOT pipeline app files and source code☆39Updated 3 weeks ago
- SpikeGLX recording system GUI [Neuropixels NI]☆101Updated this week
- Registration of cells across sessions.☆75Updated last year
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆111Updated 3 months ago
- Tools to work with Allen Inst CCF data in matlab☆143Updated 6 months ago
- A gui for browsing joint calcium imaging + behavioral data.☆54Updated last year
- Histology processing☆72Updated last month
- A curated list of awesome Neuropixels resources.☆123Updated last month
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆158Updated last week
- Python package to handle probe layout, geometry and wiring to device.☆77Updated last week
- Match suite2p ROIs between imaging sessions☆28Updated 6 years ago
- Utilities for managing Neuropixel datasets and Kilosort results☆48Updated 8 months ago
- Free, platform independent, behavior tracking software.☆143Updated 7 months ago
- EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…☆83Updated last year
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆181Updated 6 months ago
- Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.☆71Updated this week
- Region Of Interest Classification and Tracking☆27Updated this week
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days☆73Updated last week
- Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF☆107Updated this week
- Web app for viewing results of ephys spike sorting☆27Updated 4 months ago
- A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.☆65Updated last year