Alternatives and similar repositories for Photometry_data_processing

Users that are interested in Photometry_data_processing are comparing it to the libraries listed below

• int-brain-lab / iblapps
  pyqt5 dependent applications for IBL sessions
  ☆27Updated last week
• petersaj / neuropixels_trajectory_explorer
  Neuropixels trajectory explorer with the Allen CCF mouse atlas
  ☆74Updated last month
• djamesbarker / pMAT
  Fiber Photometry Modular Analysis Tool Suite
  ☆39Updated 3 years ago
• denisecailab / minian
  miniscope analysis pipeline with interactive visualizations
  ☆93Updated 10 months ago
• leomol / FPA
  Fiber photometry analysis
  ☆22Updated 2 months ago
• DeNardoLab / BehaviorDEPOT
  Repository for BehaviorDEPOT pipeline app files and source code
  ☆38Updated 8 months ago
• Whitlock-Group / HERBS
  ☆51Updated 9 months ago
• Coen-Lab / chronic-neuropixels
  CAD files for the Apollo Implant: a device for Chronic Neuropixels Implantation
  ☆23Updated 2 months ago
• ransona / ROIMatchPub
  Match suite2p ROIs between imaging sessions
  ☆25Updated 6 years ago
• djoshea / neuropixel-utils
  Utilities for managing Neuropixel datasets and Kilosort results
  ☆46Updated 3 weeks ago
• neuroethology / bentoMAT
  A gui for browsing joint calcium imaging + behavioral data.
  ☆51Updated 4 months ago
• EnnyvanBeest / UnitMatch
  Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days
  ☆63Updated last week
• wildrootlab / SHARCQ
  Tools to register histological section images and cell count locations to mouse brain atlas
  ☆26Updated 3 years ago
• sanworks / Bpod_Gen2
  Repository for 2nd generation Bpod platform (formerly beta branch of Bpod repository)
  ☆34Updated 2 months ago
• schnitzer-lab / EXTRACT-public
  EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…
  ☆73Updated 5 months ago
• PeyracheLab / pynacollada
  pynapple collaborative data analysis (high level python scripts)
  ☆37Updated last year
• SjulsonLab / methods_class
  "Approaches to Study Neural Circuits" course
  ☆65Updated 5 months ago
• m-beau / NeuroPyxels
  NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…
  ☆124Updated 4 months ago
• kushalkolar / MESmerize
  Platform for Calcium Imaging analysis. DEPRECATED.
  ☆60Updated last year
• deisseroth-lab / multifiber
  A GUI and library for doing multi-fiber photometry
  ☆18Updated 7 years ago
• petersaj / AP_histology
  Histology processing
  ☆65Updated last month
• SpikeInterface / probeinterface_library
  Collection of probe description for probeinterface
  ☆13Updated 2 months ago
• AllenNeuralDynamics / aind-ephys-spikesort-kilosort25-full
  CodeOcean capsule for full electrophysiology analysis pipeline using Kilosort2.5 via SpikeInterface.
  ☆12Updated last year
• SpikeInterface / probeinterface
  Python package to handle probe layout, geometry and wiring to device.
  ☆65Updated last week
• bahanonu / ciatah
  CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…
  ☆89Updated 6 months ago
• jenniferColonell / ecephys_spike_sorting
  Modules for processing extracellular electrophysiology data from Neuropixels probes
  ☆60Updated 2 weeks ago
• ThomasAkam / Point_Grey_Bonsai_multi_camera_acquisition
  Configurable acquisition from multiple FLIR/Point Grey camera using Bonsai and Python to h264 compress the video on the GPU.
  ☆14Updated 2 months ago
• catalystneuro / neuroconv
  Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.
  ☆59Updated this week
• JinghaoLu / MIN1PIPE
  A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.
  ☆59Updated 11 months ago
• billkarsh / SpikeGLX
  SpikeGLX recording system GUI [Neuropixels NI]
  ☆90Updated last week