Alternatives and similar repositories for Photometry_data_processing:

Users that are interested in Photometry_data_processing are comparing it to the libraries listed below

• int-brain-lab / iblapps
  pyqt5 dependent applications for IBL sessions
  ☆26Updated last week
• petersaj / neuropixels_trajectory_explorer
  Neuropixels trajectory explorer with the Allen CCF mouse atlas
  ☆73Updated 6 months ago
• DeNardoLab / BehaviorDEPOT
  Repository for BehaviorDEPOT pipeline app files and source code
  ☆36Updated 5 months ago
• leomol / FPA
  Fiber photometry analysis
  ☆22Updated 3 months ago
• djamesbarker / pMAT
  Fiber Photometry Modular Analysis Tool Suite
  ☆36Updated 3 years ago
• djoshea / neuropixel-utils
  Utilities for managing Neuropixel datasets and Kilosort results
  ☆46Updated last year
• Whitlock-Group / HERBS
  ☆51Updated 6 months ago
• neuroethology / bentoMAT
  A gui for browsing joint calcium imaging + behavioral data.
  ☆51Updated 2 months ago
• denisecailab / minian
  miniscope analysis pipeline with interactive visualizations
  ☆92Updated 8 months ago
• EnnyvanBeest / UnitMatch
  Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days
  ☆55Updated 3 weeks ago
• ransona / ROIMatchPub
  Match suite2p ROIs between imaging sessions
  ☆25Updated 5 years ago
• kushalkolar / MESmerize
  Platform for Calcium Imaging analysis. DEPRECATED.
  ☆60Updated last year
• petersaj / AP_histology
  Histology processing
  ☆65Updated 2 weeks ago
• SpikeInterface / probeinterface
  Python package to handle probe layout, geometry and wiring to device.
  ☆60Updated last week
• sanworks / Bpod_Gen2
  Repository for 2nd generation Bpod platform (formerly beta branch of Bpod repository)
  ☆34Updated 3 weeks ago
• PeyracheLab / pynacollada
  pynapple collaborative data analysis (high level python scripts)
  ☆37Updated 11 months ago
• cortex-lab / sortingQuality
  Functions to assess quality of spike sorting results
  ☆32Updated last year
• SpikeInterface / spiketoolkit
  Python-based tools for pre-, post-processing, validating, and curating spike sorting datasets.
  ☆50Updated 3 years ago
• zivlab / CellReg
  Registration of cells across sessions.
  ☆73Updated 7 months ago
• jenniferColonell / ecephys_spike_sorting
  Modules for processing extracellular electrophysiology data from Neuropixels probes
  ☆59Updated 3 weeks ago
• ThomasAkam / photometry_preprocessing
  Fiber photometry data preprocessing - denoising, photobleaching and motion correction.
  ☆26Updated last year
• Coen-Lab / chronic-neuropixels
  CAD files for the Apollo Implant: a device for Chronic Neuropixels Implantation
  ☆21Updated 3 weeks ago
• Julie-Fabre / awesome_neuropixels
  A curated list of awesome Neuropixels resources.
  ☆94Updated last month
• flatironinstitute / neurosift
  Browser-based NWB visualization and DANDI exploration
  ☆53Updated this week
• schnitzer-lab / EXTRACT-public
  EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…
  ☆71Updated 3 months ago
• MouseLand / pykilosort
  WIP: Python port of Kilosort2
  ☆50Updated last year
• wildrootlab / SHARCQ
  Tools to register histological section images and cell count locations to mouse brain atlas
  ☆25Updated 2 years ago
• bahanonu / imaging_tools
  A table containing imaging analysis tools for biology, with a focus on calcium imaging.
  ☆48Updated last year
• simonarvin / braincoordinator
  Open-source stereotaxic coordinator
  ☆15Updated 2 years ago