katemartian / Photometry_data_processing
☆26Updated last year
Alternatives and similar repositories for Photometry_data_processing:
Users that are interested in Photometry_data_processing are comparing it to the libraries listed below
- Fiber photometry analysis☆22Updated last month
- pyqt5 dependent applications for IBL sessions☆26Updated 3 weeks ago
- Fiber Photometry Modular Analysis Tool Suite☆38Updated 3 years ago
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆73Updated 3 weeks ago
- Repository for BehaviorDEPOT pipeline app files and source code☆38Updated 7 months ago
- ☆51Updated 8 months ago
- miniscope analysis pipeline with interactive visualizations☆93Updated 9 months ago
- A GUI and library for doing multi-fiber photometry☆18Updated 7 years ago
- EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…☆73Updated 4 months ago
- Registration of cells across sessions.☆75Updated 8 months ago
- Repository for 2nd generation Bpod platform (formerly beta branch of Bpod repository)☆34Updated last month
- Match suite2p ROIs between imaging sessions☆25Updated 6 years ago
- CAD files for the Apollo Implant: a device for Chronic Neuropixels Implantation☆23Updated last month
- A gui for browsing joint calcium imaging + behavioral data.☆51Updated 3 months ago
- Code for Functional Mixed Models for Fiber Photometry☆11Updated last month
- Utilities for managing Neuropixel datasets and Kilosort results☆46Updated last year
- A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.☆59Updated 10 months ago
- "Approaches to Study Neural Circuits" course☆65Updated 4 months ago
- Tools to register histological section images and cell count locations to mouse brain atlas☆25Updated 2 years ago
- pynapple collaborative data analysis (high level python scripts)☆37Updated last year
- Multi-probe trajectory planning in an intuitive 3D environment☆53Updated 3 weeks ago
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days☆58Updated last week
- Histology processing☆65Updated 2 weeks ago
- Region Of Interest Classification and Tracking☆18Updated last week
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆87Updated 5 months ago
- A curated list of awesome Neuropixels resources.☆101Updated 3 months ago
- Python code implementing the ZETA-test☆26Updated last month
- Functions to assess quality of spike sorting results☆32Updated last year
- Platform for Calcium Imaging analysis. DEPRECATED.☆60Updated last year
- ☆11Updated 8 years ago