katemartian / Photometry_data_processing
☆26Updated last year
Alternatives and similar repositories for Photometry_data_processing:
Users that are interested in Photometry_data_processing are comparing it to the libraries listed below
- Repository for BehaviorDEPOT pipeline app files and source code☆36Updated 6 months ago
- Fiber Photometry Modular Analysis Tool Suite☆38Updated 3 years ago
- pyqt5 dependent applications for IBL sessions☆26Updated this week
- miniscope analysis pipeline with interactive visualizations☆93Updated 8 months ago
- Fiber photometry analysis☆22Updated 2 weeks ago
- ☆51Updated 7 months ago
- A gui for browsing joint calcium imaging + behavioral data.☆51Updated 2 months ago
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆73Updated 7 months ago
- Histology processing☆65Updated this week
- A GUI and library for doing multi-fiber photometry☆18Updated 7 years ago
- Tools to register histological section images and cell count locations to mouse brain atlas☆25Updated 2 years ago
- Code for Functional Mixed Models for Fiber Photometry☆10Updated 3 weeks ago
- CAD files for the Apollo Implant: a device for Chronic Neuropixels Implantation☆22Updated 3 weeks ago
- Multi-probe trajectory planning in an intuitive 3D environment☆52Updated this week
- Registration of cells across sessions.☆75Updated 7 months ago
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days☆57Updated 2 weeks ago
- pynapple collaborative data analysis (high level python scripts)☆37Updated last year
- A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.☆59Updated 9 months ago
- Match suite2p ROIs between imaging sessions☆25Updated 6 years ago
- Repository for 2nd generation Bpod platform (formerly beta branch of Bpod repository)☆34Updated 2 weeks ago
- Utilities for managing Neuropixel datasets and Kilosort results☆46Updated last year
- ☆11Updated 8 years ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆60Updated last year
- Tools to work with Allen Inst CCF data in matlab☆131Updated last year
- A curated list of awesome Neuropixels resources.☆97Updated 2 months ago
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆59Updated last month
- Functions to assess quality of spike sorting results☆32Updated last year
- Feeding Experimentation Device version 3☆26Updated 7 months ago
- Fiber photometry data preprocessing - denoising, photobleaching and motion correction.☆26Updated last year
- Bonsai package for controlling headborne, calcium imaging miniscopes☆12Updated last year