SimBA (Simple Behavioral Analysis), a pipeline and GUI for developing supervised behavioral classifiers
☆357May 16, 2026Updated last week
Alternatives and similar repositories for simba
Users that are interested in simba are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Behavioral segmentation of open field in DeepLabCut, or B-SOID ("B-side"), is a pipeline that pairs unsupervised pattern recognition with…☆209Feb 9, 2024Updated 2 years ago
- Variational Animal Motion Embedding - A tool for time series embedding and clustering☆201Oct 3, 2024Updated last year
- R Scripts to analyze deep lab cut point data and related data☆72Jan 25, 2023Updated 3 years ago
- ☆123Mar 31, 2026Updated last month
- End-user version of the Mouse Action Recognition System (MARS)☆79Mar 26, 2024Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Various scripts to support deeplabcut and what to do afterwards!☆162Jul 1, 2025Updated 10 months ago
- Repository for BehaviorDEPOT pipeline app files and source code☆42Jan 6, 2026Updated 4 months ago
- A deep learning framework for multi-animal pose tracking.☆581Updated this week
- Closed-loop behavioral experiment toolkit using pose estimation of body parts.☆64Jul 1, 2023Updated 2 years ago
- Official implementation of DeepLabCut: Markerless pose estimation of user-defined features with deep learning for all animals incl. human…☆5,634May 15, 2026Updated last week
- DeepLabCut based data analysis package including pose estimation and representation learning mediated behavior recognition☆54Updated this week
- Guided Photometry Analysis in Python, a free and open-source FP analysis tool.☆85May 14, 2026Updated last week
- Free, platform independent, behavior tracking software.☆146Jun 20, 2025Updated 11 months ago
- Fiber Photometry Modular Analysis Tool Suite☆44Jul 26, 2021Updated 4 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- A Bonsai interface for real-time markerless pose estimation using DeepLabCut☆54Jun 1, 2025Updated 11 months ago
- quantification of behavior across chronic social defeat stress☆11Jun 30, 2022Updated 3 years ago
- A gui for browsing joint calcium imaging + behavioral data.☆56Jan 22, 2025Updated last year
- A tool for drawing ROIs on videos and analysing deeplabcut videos.☆35Apr 24, 2026Updated 3 weeks ago
- We turn natural language descriptions of behaviors into machine-executable code☆239Jun 30, 2025Updated 10 months ago
- ☆249Apr 25, 2025Updated last year
- AlphaTracker is a computer vision pipeline with the practical and real-time advantages , which requires minimal hardware requirements and…☆75Sep 26, 2023Updated 2 years ago
- Quantify user-defined behaviors.☆106Jan 23, 2026Updated 3 months ago
- ☆31Jun 6, 2019Updated 6 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- PyRat is a user friendly library in python to analyze data from the DeepLabCut. Developed to help researchers unfamiliar with programming…☆53Apr 22, 2024Updated 2 years ago
- An active learning platform for expert-guided, data efficient discovery of behavior.☆74Jun 11, 2025Updated 11 months ago
- A Python toolbox for analysing animal body movements across space and time☆277May 15, 2026Updated last week
- Distributed behavioral experiments☆94Feb 19, 2025Updated last year
- ☆109May 5, 2026Updated 2 weeks ago
- For developers and people training MARS models☆19Mar 15, 2024Updated 2 years ago
- MoSeq2 Jupyter Notebook platform used to run all of the MoSeq2 tools in a GUI.☆41Feb 18, 2026Updated 3 months ago
- A Python package to visualise neuroanatomical data in atlas space☆652May 12, 2026Updated last week
- miniscope analysis pipeline with interactive visualizations☆98Jul 19, 2024Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Variational Animal Motion Embedding - A tool for time series embedding and clustering☆47May 7, 2026Updated 2 weeks ago
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆191Jan 26, 2026Updated 3 months ago
- ☆29Oct 22, 2025Updated 7 months ago
- Demo code for CAPTURE and DANNCE☆29Jul 7, 2021Updated 4 years ago
- ☆10Mar 15, 2023Updated 3 years ago
- Behavioral Observation Research Interactive Software☆235May 15, 2026Updated last week
- Bonsai package for controlling headborne, calcium imaging miniscopes☆12Mar 4, 2024Updated 2 years ago