QijinYin / DeepHistone
☆17Updated 6 years ago
Alternatives and similar repositories for DeepHistone:
Users that are interested in DeepHistone are comparing it to the libraries listed below
- A neural network framework for predicting the Hi-C chromatin interactions from megabase scale DNA sequence☆33Updated 9 months ago
- ☆18Updated 2 years ago
- ☆31Updated 5 years ago
- Epimap processing and analysis code repository☆33Updated 2 years ago
- PECA is a software for inferring context specific gene regulatory network from paired gene expression and chromatin accessibility data☆42Updated last year
- DeepTACT: predicting three-dimensional chromatin contacts via bootstrapping deep learning☆20Updated 4 years ago
- HLA-II ligand predictor.☆41Updated last year
- Knowledge-primed neural networks☆35Updated last year
- Deep Learning Method to Identify Cancer Associated TCRs☆46Updated 2 years ago
- ☆22Updated 7 years ago
- Tutorials and code for ISMB 2019 short course on Recent Advances in Statistical Methods and Computational Algorithms for Single-Cell Omic…☆39Updated 5 years ago
- Deep neural networks for predicting CpG methylation☆37Updated 7 years ago
- ☆47Updated 2 years ago
- ☆38Updated 4 years ago
- Predicting gene expression levels from genomic sequences☆51Updated 4 years ago
- Clonotype Neighbor Graph Analysis☆83Updated 5 months ago
- An actionable database of publicly available single-cell RNA-seq data☆41Updated 5 years ago
- BraCeR - reconstruction of B cell receptor sequences from single-cell RNAseq data☆42Updated 6 months ago
- Code related to the Celligner manuscript☆46Updated 4 years ago
- A comprehensive tool for processing, analyzing and visulizing single cell chromatin accessibility sequencing data☆24Updated 5 months ago
- immuneML is a platform for machine learning analysis of adaptive immune receptor repertoire data.☆66Updated this week
- A repository for the design and analysis of pooled single cell RNA-seq perturbation experiments.☆87Updated 5 years ago
- Mapping the Functional Landscape of TCR Repertoire☆34Updated 3 years ago
- This is the package of Yuanfang's winning algorithm in the ENCODE-DREAM in vivo Transcription Factor Binding Site Prediction Challenge☆20Updated 4 years ago
- Transcription Factor Binding Prediction from ATAC-seq and scATAC-seq with Deep Neural Networks☆27Updated this week
- Code for the paper "Integrating regulatory DNA sequence and gene expression to predict genome-wide chromatin accessibility across cellula…☆44Updated 3 years ago
- A shell to facilitate loading / running CIBERSORT software in structured environments☆26Updated 6 years ago
- ⚙️ Matching T-cell repertoire against a database of TCR antigen specificities☆38Updated 6 years ago
- ☆25Updated 8 months ago
- ☆20Updated 5 years ago