Alternatives and similar repositories for cyto-dl:

Users that are interested in cyto-dl are comparing it to the libraries listed below

• MMV-Lab / mmv_im2im
  Python package for deep learning based image to image transformation
  ☆52Updated 10 months ago
• Kapoorlabs-CAPED / VollSeg
  Segmentation method able to detect membrane/nuclei-labelled cells with low signal-to-noise ratio and dense packing in 2D and 3D. Availabl…
  ☆33Updated 3 weeks ago
• royerlab / ultrack
  Cell tracking and segmentation software
  ☆110Updated this week
• weigertlab / trackastra
  ☆69Updated 2 months ago
• weigertlab / tarrow
  Time arrow prediction for live-cell microscopy
  ☆18Updated 10 months ago
• janelia-cellmap / dacapo
  A framework for easy application of established machine learning techniques on large, multi-dimensional images.
  ☆53Updated last month
• mehta-lab / VisCy
  computer vision models for single-cell phenotyping
  ☆45Updated this week
• volume-em / empanada
  Panoptic segmentation algorithms for 2D and 3D electron microscopy images
  ☆2Updated 2 years ago
• AllenCell / aics-ml-segmentation
  ☆31Updated 2 years ago
• kreshuklab / MorphoFeatures
  MorphoFeatures code and data
  ☆20Updated last year
• MouseLand / cellpose-napari
  napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool
  ☆52Updated 5 months ago
• funkelab / motile
  Multi-Object Tracker using Integer Linear Equations
  ☆30Updated 3 weeks ago
• BiAPoL / napari-clusters-plotter
  A napari plugin for clustering objects according to their properties.
  ☆83Updated this week
• kreshuklab / go-nuclear
  Guides and code for 3D nuclear instance segmentation
  ☆22Updated last month
• fractal-napari-plugins-collection / napari-feature-classifier
  ☆23Updated last week
• clEsperanto / napari_pyclesperanto_assistant
  GPU-accelerated general purpose image processing and image analysis in napari
  ☆35Updated 6 months ago
• czbiohub-sf / iohub
  Pythonic and parallelizable I/O for N-dimensional imaging data with OME metadata
  ☆35Updated this week
• stardist / stardist-napari
  StarDist plugin for napari
  ☆38Updated 8 months ago
• haesleinhuepf / apoc
  Accelerated Pixel and Object Classifiers (APOC)
  ☆57Updated 2 months ago
• haesleinhuepf / awesome-napari-plugins-that-are-not-on-the-napari-hub-yet
  ☆22Updated last year
• stardist / augmend
  simple package for augmentation of n-dimensional arrays
  ☆32Updated last year
• napari-threedee / napari-threedee
  A 3D interactivity toolbox for napari
  ☆34Updated this week
• napari / cookiecutter-napari-plugin
  Cookiecutter for napari plugins
  ☆69Updated 5 months ago
• funkelab / lsd
  🌈
  ☆54Updated 3 weeks ago
• constantinpape / elf
  Utils and convenience functions for large-scale bio-image analysis.
  ☆54Updated this week
• juglab / EmbedSeg
  Code Implementation for EmbedSeg, an Instance Segmentation Method for Microscopy Images
  ☆114Updated last year
• NEUBIAS / training-resources
  Resources for teaching/preparing to teach bioimage analysis
  ☆56Updated this week
• HenriquesLab / DL4MicEverywhere
  Bringing the ZeroCostDL4Mic experience running everywhere via easy-to-install docker images
  ☆76Updated this week
• napari / napari-plugin-template
  A template repo used to make new napari plugins
  ☆18Updated this week
• haesleinhuepf / napari-accelerated-pixel-and-object-classification
  GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.
  ☆43Updated last year